Culex pipiens pallens (northern house mosquito): 120432432
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Entry
120432432 CDS
T07310
Name
(RefSeq) spatacsin
KO
K19026
spatacsin
Organism
cpii
Culex pipiens pallens (northern house mosquito)
Brite
KEGG Orthology (KO) [BR:
cpii00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cpii03400
]
120432432
DNA repair and recombination proteins [BR:
cpii03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
120432432
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spatacsin_C
Motif
Other DBs
NCBI-GeneID:
120432432
NCBI-ProteinID:
XP_039453584
LinkDB
All DBs
Position
2:complement(18572375..18588026)
Genome browser
AA seq
1898 aa
AA seq
DB search
MPPERDIIIRGWEKLDDDVIIKDVATKGKHVNLCVFFLAQRNELSQTEAKNYFLQKVNAY
VYRLLANRQLYKAEHILSNIDRTSKYVFYQIAAETSDHGLRDYIRDHLRRTIDDYDGEGG
EGRLLDANWRVYCLLKGNVGQLAELLRVLDPGYSVLEIETMSFNTFYAKEEAYRNAVALD
MFFKNQETEISPLLDKHAVWGYLLRNNIDNLVKIWIQINACLRAADQHPASYSAEVAKIK
IDIYDDPRFNERLRQLFRRWEISDFMVSQLSGHKSMTKNEVLLNVLATYGKFVEQERGDA
LVILRRLFTTQTVEVNRGWLEQKVFREGLTRHLVENRLFQLMDLSVVSEECLERLVEDEN
CDNRKELELFMALRGLKEDSISGEGLLVVSRKSSEYLLETQESFYDDNPIMFLFEHFLNP
SNAAFPDDDQRFWKLAHLRSFLARLKDNPISIVSAKELMNLHELPCLEKIRSNLFKDLDG
TCDEEEACAKKEAILREHGYVPHFNHPLLCEKYSTEVKLNYLHYIKQQRSCYALYLFYVD
QLRSYARITPQQINSAARTASEVALGHYNDANLVSHCTAFIEMLGVDSSRTRAYIRCLNM
LNETATLREISTVELIEQCEDVLESRTWDDPNLLLDLEAMTTVCRASQLSFPEKYLKQLL
NENDWFRFLLLVEYLDYPQEQILALSKSSFQNATIGSNVMRAIKYYTESAGSLRRESTPT
SLKKRNSWTPKKRRRGSSISNAGGDSHSSVSSESDIQSSTTTTTTTNRRHSTISESSLGG
GLDYDGSRYLAERYDRDLFATVLLCSNEADTLRSGRCTLDFDGFRQLMLGRKQGGTFGNL
LDRAVARRWPLLAVLAGMVAESNRKYCWVTWLMVSISYPFYEKLKELSEVEFLQDLLEFS
VQKGYVQILQDSVSLFYPDSNLCNLTKYFVNTTKLDFSQITTDHLRHFLLKVNDCPLLGL
KKLEMIAFGVKLLTLHVDNNFSSLYQQTCMLETLVSSDINCFTQKIDFVRLLKFCNILKP
TTVRIAFINFFDREDLRQQFEALCEQLVSHKNYTQAIEIAELSALPRDSIIFEHWISDFE
TNEECDFSQYQSDMTRYDVGPELLLNFFIHIANRLEYGNRTKYDLLKRALELIKQHGLYP
SQLYDRDRLEYELALAYVKCSENPSTLPLYHSHFFSNTLKRDGGILYHTFMELKEVAGID
DLTVSNLPLEHPTERSRLDGLIHRLLKEGDIVQALRYQAIFEQRPYDLHFVVFCMGLAES
VLSLYNLSKEERLMLNEDCKRVSLHMQRRTLRLSRMSQCSANTSSIGSPARLESSDTSAG
ASEFEEVPSRERQNVLEAINGLGAKIQYGQDLAQRVILTYRIAMYLDREYNEILKIRDPV
GFLEEVIREDCFNKLEVISDIMTSHRMSDATISRFLAREIVTAVVRSKFYMLQQGSPLAN
AKPIDELLWGYNIDREFHLFLELAPNTTMLGNWLLKYCDAIKCYKRLEKSPDRSSMTESV
VDDVEPTLLDNLKEIFKNQILSLKKQNTIIVALLVKAHDCFVHECSVEGIVEVLQRCKSL
NNVLTGAKSWNLIVKLLVGIGRYREMYYCFETLIKNDQFESLLGQFDEKHTNGLKTAIIS
YLHEHCPAQKEFFRLAALHFLMYKEIAEMWETEAKSSIAKVLSVYELRNPTTTANTSPKI
CMPRLICDPLAFSELNSALEAYTHATENYLLDNKLNLAQKIASNAELVALQLCLIEQAKT
ERSNPAEDSRTCISVLNIKKDEKGSNLAYFVNTALSVPQALIISRTYEYEINWTQALYQH
YIVNGSTPYLEDYLDRMPLTDEMVESLVKTFQLEPCVTPEMERAIATLVEMVETVTLKYR
LASLLGLKRTVHELINENSFYYLKDCDYGRSESVSMGS
NT seq
5697 nt
NT seq
+upstream
nt +downstream
nt
atgccaccggagcgagatatcatcattcgggggtgggaaaagctagacgatgacgtcatc
atcaaagatgttgccaccaagggtaaacacgtcaacctttgcgtgttctttctggcccaa
aggaacgagctttcgcagaccgaggcgaagaattattttctgcagaaggtcaacgcgtac
gtctaccggctgctcgcgaaccgccagctctacaaagccgaacacatcctgtccaacatc
gaccgcacctccaagtatgtgttctaccagatagcggcggaaacgagcgaccacggcctg
cgggactacatccgggaccatctgcggcgcacgatcgacgattacgacggcgagggcggc
gaggggcgcctgctggacgccaactggcgagtgtactgtctgctgaagggcaacgtcggc
cagctggccgagctgctccgggtgctggatccgggctacagcgtgctggaaatcgaaacg
atgtcattcaatacgttctacgcgaaggaggaagcgtaccggaacgcggtggcgctggac
atgttcttcaagaatcaagaaacggaaatctctccgctgctggacaagcacgccgtttgg
ggatatctgctgcggaacaacatcgacaacctggtcaagatctggattcagatcaacgcg
tgcttgcgggcggcggaccagcatccggcgagctactcagcggaggtggccaagatcaag
atcgacatttacgatgatccgcggtttaatgagcggttgcggcaactgtttcggaggtgg
gagatcagcgactttatggtttcgcagctgtccggccacaagagcatgaccaagaatgag
gtgttgctgaacgtgctggcgacttatgggaaatttgtggagcaggagcggggcgatgca
ttggtgatcttgaggagactgtttacgacgcaaacggttgaggttaatcggggttggctg
gagcagaaggtgtttcgggaggggttgacacggcatttggtggagaatcggctgtttcag
ctgatggatttgtcggtggtgagtgaggagtgtttggagcggctggtggaggacgaaaac
tgtgataaccggaaggagttggagttgtttatggcacttagagggcttaaagaagatagt
attagtggggaagggttgctggtggtttcgaggaagagttccgagtatttgttggagacg
caggagagtttttacgatgataatccgatcatgtttctgttcgagcactttctcaatccg
agcaatgcggcgttcccggatgatgatcagcggttttggaagctggctcatttgaggagt
ttcctggctcggctgaaggacaacccgatatcgatcgtatcggcgaaggagttgatgaat
ctacacgagctgccttgcttggagaagattcgaagcaatttgttcaaggatttggatgga
acctgcgatgaagaggaagcgtgcgcaaagaaggaagcgatcctgcgagaacatggctac
gtaccgcactttaaccatccactgctgtgcgaaaagtactcgaccgaggtcaagctcaac
tacttgcactacatcaagcagcaacgatcgtgctacgccctgtacctgttctacgtggac
cagctacgaagctacgctcgaattacgccacagcagatcaacagcgcagcaagaactgct
tccgaggtcgccctcggacactacaatgatgccaacctggtgtcgcactgtacggccttc
atcgaaatgctgggcgtggacagctcgcgaacgcgagcctacatccgttgcttgaacatg
ctgaacgaaactgccactctcagggagatctcgaccgtcgagttgatcgagcagtgtgaa
gacgttctggaaagtagaacttgggatgatcccaacctgctgctagacctggaagcaatg
accaccgtctgtcgagctagccaactgagcttcccggaaaagtatctcaagcaactcctc
aacgaaaacgactggttccgcttcctgcttctcgtcgaatacctggactacccgcaagag
cagatcctagccctgagcaaatccagcttccaaaacgccaccatcggcagcaacgtgatg
cgcgccatcaagtactacaccgagtcggcgggttcactgcgccgcgaatcaacgccaacc
tccctcaagaagcgcaacagctggacgccaaagaagcgacgacggggcagcagcattagc
aacgccggcggcgacagccattcgagcgtatcgagtgagagtgacatccagtccagcact
acgacgacgaccacgaccaacaggcgccactcgaccattagcgagtcttcgcttggtggt
gggttggactacgacggatcgcgctacctcgccgagcggtacgatcgtgaccttttcgcc
actgtgctgctgtgctcgaatgaggccgatacactgcgatcgggccggtgcacgctggat
tttgacgggtttagacagctgatgctgggacggaagcagggcgggacgtttgggaatctg
ttggatcgtgccgtggcgagacgatggccgctgttggcggttctggcgggaatggtagcg
gagagcaatcgcaagtactgttgggtcacctggttgatggtatcgatcagctatccgttc
tatgagaaacttaaggaactatccgaggtcgagttcctgcaagatttgctcgagttcagc
gttcagaaaggttacgtccagatattgcaggactcggttagcttattctaccccgattca
aacctgtgtaacttgaccaaatatttcgtcaacactacaaagttggacttttcccaaatc
acaaccgatcacttgcgacatttcttgctaaaagtcaacgattgtccgctactcggacta
aagaaactggagatgatcgcgttcggggtcaaactgctcaccctgcacgtagataacaac
ttcagctcgctctaccagcaaacctgcatgctggagacgctcgtctcctcagacatcaac
tgcttcacacagaaaatcgactttgtccgactgctcaagttctgcaacatcctgaaaccc
acaacggtgaggatcgcattcatcaacttcttcgatcgcgaagacctgcgccaacagttt
gaagccctctgcgagcagctcgtctcgcacaaaaactacacgcaagccatcgagatcgcc
gagctgtccgccctccctcgcgactcgatcatcttcgagcactggatcagcgactttgaa
accaacgaggagtgcgacttttcccagtaccaatcagacatgacccgctacgacgtcggt
ccggagctcctcctgaacttcttcatccacatcgcgaaccgactcgagtacggcaaccgg
acaaagtacgacctcctaaagcgagctctcgagctcatcaaacagcacggtctctacccg
agtcaactgtacgaccgcgatcgtctcgagtacgagctggcgctggcttacgtgaaatgt
tccgagaacccctccacgctacccctctaccactcgcacttcttcagcaacacgctcaag
cgcgacggtggcatcctctaccacaccttcatggagctcaaagaggtagccgggatcgac
gatctgaccgtttcgaatcttccgctggaacaccccacggaacgatcgcgtctcgatggc
ctgatccaccgactgctcaaagaaggcgacatcgtgcaagccctacgctaccaggcaatc
ttcgagcagcgtccgtatgatctgcactttgtggtgttctgcatgggactcgccgagtcc
gtgctcagcttgtacaacctctccaaggaggaacgccttatgctgaacgaggactgcaag
cgggtatcgctgcacatgcagcgtagaacactgcgcttgagccggatgagtcagtgctcg
gcgaatacctcctccataggatctccggcgcgactcgagtcgtcggatacgagtgcggga
gcttccgagttcgaggaggttccctcgcgggaacggcagaacgtgctggaggcgatcaat
ggtctcggcgccaagatccagtacggacaagacctcgcccagcgggtcatcctaacctac
cgaatagcgatgtacctcgatcgcgagtacaacgagatcctcaaaatccgcgatcccgtc
ggcttcctagaggaagtgatccgcgaggactgcttcaacaaactggaagtgatcagcgac
attatgacttcgcaccggatgagtgacgccacaatttcacggtttctagctcgggagatc
gtcaccgctgtggtcagatccaagttctacatgcttcagcaaggttcgccactggcgaat
gcaaaaccgatcgacgaactgctctggggttataacatcgatcgagagttccacctcttt
ctggaactcgcgcccaacacgaccatgctgggcaactggctgctcaagtactgcgacgcg
atcaagtgctacaagcggctggaaaagtcaccggatcgttcctccatgacggaatccgtc
gtagacgacgttgaaccaaccctgctcgataacctcaaagagatcttcaagaaccagatc
ctgtcgctcaaaaagcaaaacacgatcatcgtcgcgctgctcgtcaaagcccacgactgc
ttcgtgcacgagtgctccgtcgaaggcatcgttgaagtcctgcagcggtgcaagtccctg
aacaacgtgctcaccggcgccaagtcgtggaacttgatcgtcaaactgctcgtcggcatc
ggacgctaccgggagatgtactactgcttcgagacgctcatcaagaacgatcagtttgaa
tcgctgctggggcagtttgacgagaagcacacgaatggcctcaagaccgcgatcatctcc
tacctccacgagcactgcccggcacaaaaggaattcttccggctggcagcacttcacttc
cttatgtacaaggagatcgccgaaatgtgggaaacggaagccaagtccagtatcgccaaa
gtcctgtcagtgtacgagttgaggaatcccacgaccactgccaatacaagtcccaagatc
tgcatgcctcgactgatctgcgacccgttggcgttctccgagctaaactccgccttggag
gcgtacacgcatgctacggaaaactacctactggacaataagctgaacttggcccagaag
atcgcttcaaacgctgaactggtagcgttacagctctgtctaatcgagcaagccaaaaca
gagcggagcaaccccgctgaagattctcgaacctgcatttcagttctgaacatcaaaaag
gacgaaaagggctcgaatctcgcgtactttgtcaacactgcactgagcgtcccgcaagcc
ctcatcatctcgcgaacgtacgagtacgagatcaactggacgcaagccctgtaccagcac
tacatcgtaaacggctccacgccctacctggaggattacctcgatcggatgcccctcacc
gacgagatggtcgaaagtctcgtcaaaacgttccagctggagccgtgcgtgacgccggaa
atggaacgcgccatcgcgacgctcgtcgagatggtcgaaaccgtaacgctcaagtaccgg
ctggcgtcgctgctcggcctcaagcggaccgtccacgagctgatcaacgagaacagtttt
tactacctgaaggattgtgactatgggaggagcgagagcgttagcatggggagctga
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integrated database retrieval system
