Culex pipiens pallens (northern house mosquito): 120432436
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Entry
120432436 CDS
T07310
Name
(RefSeq) ATP-dependent DNA/RNA helicase DHX36
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
cpii
Culex pipiens pallens (northern house mosquito)
Pathway
cpii03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cpii00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
120432436
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpii03019
]
120432436
03012 Translation factors [BR:
cpii03012
]
120432436
Enzymes [BR:
cpii01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
120432436
Messenger RNA biogenesis [BR:
cpii03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
120432436
Translation factors [BR:
cpii03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
120432436
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C
DEAD
OB_NTP_bind
HA2_C
HA2_N
nSTAND3
AAA_19
ATPase
ResIII
Cas3-like_C_2
AAA_22
DUF2202
PhoH
T2SSE
NACHT
HEPN_AbiA_CTD
SRP54
AAA_30
Motif
Other DBs
NCBI-GeneID:
120432436
NCBI-ProteinID:
XP_039453588
LinkDB
All DBs
Position
2:complement(18491228..18509358)
Genome browser
AA seq
1089 aa
AA seq
DB search
MSDCEDSFEEKLRKFRLNKESNPVETKTEHQPEPDMSYRSRGGGGPSRGGRGGRGNLRGK
QIGLYYANKNRGRNRDEDGEDGQWRSGKDLQRNKNRERMAYEGGDGGRDANRFRRFGDER
DDQVVTGRDRPPPGLRGRALGLYYRDRNSAKNREREKRKAVDITIPRWQILEIRKYLNLE
DGGGGKVDFFRHFVQNDEIDSVFKNEYLKVISKSLDQILREESVKEEDMLEQWQLDAKET
LNADLYDEYLRKEKFGVMREVRERLPAFGSQHEILQMIDRHQVILVKGETGSGKTTQIPQ
FILDQAMSKRRGADCRIICTQPRRISAITLSERVAAERGEQLGDSVGYQIRLDAKKPRSA
GASIVFCTTGIVLSIMQSDPCLKEYSHLILDEIHERDVITDLLLGIVKKILPFRKDLKII
LMSATLTAETFSRYFNDCPTVEIPGLTFPVEEFYLEDIISEINFHGFNPGPKKPNYRDRQ
MLQFFDMIDPYIQTIRGQYPAKVLQTIANPLSESSQNDLITELIYHISATKPDGAILVFL
PSLAQISDVQKLLSAHRDLSRMSTLIYPLHSKVPQLDQKAVFSRPQKGTRKIILATNIAE
TSITIDDVVFVVNAGRHKINMFEEGVSSLRDEWISISNEIQRKGRAGRVQPGICYHLYTR
GRRNVLLQNTPPEILRVALDEVILNIKILGLGEARAFMSHLLDRPTDDVIETSLELLNRL
NAIDDDQTLTPLGYHLARLPMDPRTGKMVLLSSIFSCADPISSIAASLSFKDAFYKPFGK
EKEVGMVKRKFAKGYHSDHLMLANVIEQWKDLTGRDVQHFAYKNFLNLGTLNQLYNMKRQ
FCEYLYSAKFLQNAQVTSMANNLNSHNDKLLKAIIGAGLYPNVAFVRKVIRNRNSPDGRS
ILNIEGQGRTTMHPSSVNSTLADFESNFVVYYDKQKISGSGLTIFDTTVVNPFPLFFFGD
NHVETEGAYELISIAGHYCLKCNKETYELIQDLRAGFNLFLQKKICNPSPVDWSSDEGTL
LRAIIQLITIDGRYEDGFDDDDFGGASSSEQRATGGGNPEQIKFDQDDDYFDYFENDDLP
PPSTSSSRR
NT seq
3270 nt
NT seq
+upstream
nt +downstream
nt
atgtccgattgtgaggattctttcgaggaaaagcttcgcaagtttcgcctgaacaaagag
tctaatccagtggaaaccaaaaccgagcatcaacccgaaccagacatgagttaccgatct
agaggcggaggcggaccgagccgcggaggtcgtggcggtcgtggtaatttgcgaggcaag
cagatcggcctgtactacgcgaacaagaatcgtgggagaaatcgggacgaggatggcgaa
gacggacagtggagaagtggcaaggatcttcagcggaacaagaaccgcgagcggatggcg
tacgagggcggggatgggggaagggatgctaaccggtttcggaggtttggggatgagcgg
gacgatcaggtggtgacggggagagatcggccaccgccggggttgcggggaagggcgctc
gggttgtactatcgggatcggaactcggcgaagaatcgcgagcgggagaagcgaaaggcg
gttgatattacgattccgaggtggcagattttggagattcggaagtatttgaacttggag
gatggtggtggggggaaggtggatttcttcagacactttgtgcagaacgatgagattgat
tcggtgtttaagaatgagtatttgaaggtgattagcaaaagtttggatcagattttgagg
gaggaatcggtgaaggaggaggatatgctggagcagtggcagctggatgcgaaggagacg
ctgaatgcggatctgtacgatgagtatttgaggaaggagaagtttggggttatgagggaa
gttcgcgagcgacttccggcgtttggttcgcagcatgagattctgcagatgatcgacagg
catcaggtcatcttggttaagggtgagactggaagtggtaaaacgacgcagattccgcag
tttatcctggaccaggcgatgtctaagcgaaggggtgccgattgtcggataatttgtacg
cagccgaggcgaatttcggcgatcacgctttcggagagagttgcagcggagcgtggtgaa
cagcttggggactcggttggttatcagatcaggttggatgcgaagaagccgcgatcggct
ggagcgagtatcgtgttctgcacgacgggaattgtcctctcgatcatgcagagcgatccc
tgcttgaaggagtattcgcacttgattctggacgaaattcacgaacgagacgttatcacg
gatcttctgttggggatcgtcaagaagattcttccgttccggaaggacttgaagatcatt
ttgatgagtgcaacgctaacggcagagacgttctctcgatacttcaacgactgtccgacg
gttgaaatccctggtttgacgttccccgttgaggagttctacctcgaagatattatatcg
gagataaacttccacggatttaacccgggaccgaagaagcccaactaccgcgatcgtcaa
atgctgcagttcttcgacatgatcgatccgtacatccaaacaatccgcggtcaatacccg
gccaaagtgctccaaaccatcgccaacccgctgagcgagtctagtcagaacgatctgatc
acggagctgatctaccacatctcagccaccaaaccagacggagcgatcctcgtgttccta
cccagtctagcgcaaatctccgacgtccaaaagcttctctccgcacatcgcgatctgtcc
cgcatgtccacccttatctacccactccactcgaaagtcccccaactcgaccaaaaagcg
gtcttctcgcgaccccaaaagggcacccgcaagatcatcctcgcaaccaacattgccgaa
acgtcgatcacaatcgacgacgtggtgtttgtggtcaacgccggtcgccacaagatcaac
atgttcgaggagggcgtctcatcgctgcgcgacgaatggatctcgatctcgaacgaaatc
cagcgcaagggacgcgcgggtcgtgttcaacccggcatctgctaccatctgtacacgcga
ggacggcgtaacgtgctgcttcagaatacaccgccggagattctgcgcgttgcgctggac
gaggtcatcttgaacatcaagatcctcgggttgggagaggctcgggcatttatgagtcat
ctgctcgatcgtccgacggacgacgtgatcgagacatcgctggagctgcttaaccgactg
aacgcgatcgacgatgatcagacgttgaccccgttggggtaccatttggcacgacttccg
atggacccgcggacagggaagatggttctgctgtcgagtatcttcagctgcgccgacccg
atctcgtcgatcgcggcaagtctctcgttcaaggacgcgttctacaaaccattcgggaag
gagaaggaggtcggaatggtaaagcggaagttcgccaaaggttaccacagcgatcatctg
atgttggcgaacgtgatcgaacagtggaaagacctgacaggtcgggacgttcagcacttt
gcgtacaagaacttcctgaacttgggcacgctcaaccagctgtacaacatgaagcgccag
ttctgcgagtacctctactcggccaagttcctccagaacgcccaggtgacgtccatggcg
aacaacctcaactcccacaacgacaagctgctgaaggcgatcatcggagccgggctgtac
ccgaatgtggcgttcgtgcggaaggtcatccgcaaccggaactcacccgacgggcggtcc
attttaaatatcgaaggacagggcagaactacgatgcatccttcgtcggtgaacagcacg
ctggcggactttgagtccaacttcgtggtgtactacgacaagcagaagatctccggctcg
ggactgaccattttcgacacgacggtggtgaatccgttcccgctgttcttcttcggcgat
aaccacgtcgagacggagggcgcgtacgagttgatctcgatcgctggtcactactgcctc
aaatgcaacaaggaaacgtacgagctaatccaggacctgcgcgccggcttcaacctcttt
ctccagaagaagatctgcaacccgtcgccggtggactggtcgtcggacgagggcacgctt
ctgcgggcaatcatccagctaatcacgatcgatgggcggtacgaggacgggtttgatgac
gacgactttgggggagcttcgtcctcggagcagcgggccaccggtggtggaaatccggag
cagatcaaattcgaccaggatgacgactattttgattactttgagaacgatgatttgccg
ccaccgtcgacgagcagcagcagacgatag
DBGET
integrated database retrieval system
