Culex pipiens pallens (northern house mosquito): 120432438
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Entry
120432438 CDS
T07310
Name
(RefSeq) pre-mRNA-processing factor 40 homolog A
KO
K12821
pre-mRNA-processing factor 40
Organism
cpii
Culex pipiens pallens (northern house mosquito)
Pathway
cpii03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cpii00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
120432438
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cpii03041
]
120432438
Spliceosome [BR:
cpii03041
]
Complex A
U1 snRNP components
U1 related factors
120432438
Complex B
120432438
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FF
WW
WW_TCERG1
RhoGAP-FF1
SL4P
PAN_3
GIDA_C_1st
Motif
Other DBs
NCBI-GeneID:
120432438
NCBI-ProteinID:
XP_039453590
LinkDB
All DBs
Position
2:complement(19616569..19627159)
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AA seq
815 aa
AA seq
DB search
MSVPPVQPFPAMVPFSVPPPTAMAAMPVSEWTEHKAPDGRMYYYNSKTKQSLWEKPDELK
SPAEKLLAACPWKEYKSDQGKVYYHNVNTKESQWVAPLEYSELKDKVEAERLAAEAAKAA
AVKTLGAVAAGLPLMIPPVVLPVVSPAMGGDSLGSFSGVMPGSAENSSSALDQAMAATLA
AIEVPEEPAPSKGAVEEVPPVEEEPVIEFKDKKEAIEAFKEFLKEKNIPSSASWEQCVKI
CQKDPKFNVFKKLQEKKQAFNAYKTQKQKDEKEEQRLKVKRCKEDLEKFLMTSEKMNSTM
KFYRCDELFASLDVWKSVPEQDRRDIYEDCIFNLQKREKEESRLLKKRNMRVLGELLEAM
TTVSYQTTWSEAQVMLLENVSFKSDVNLLGMDKEDALIVFEEHIRALEREEDEEKEREKK
RTKRQQRKNRDQFLALLDGLHEEGKLTSMSLWVELYPIISADLRFSAMLGQIGSTPLDLF
KFYVENLKARFHDEKKVIKEILREKEFFVQSTTTFEDFATVVCEDKRSATLDAGNVKLTY
NSLLEKAEAAEKERLKEETRRIRKLESELKSIWIEAGLSAVDSWETAQKLVADLEVYDLY
EQEDKVERLWEEFIKEAEDSCSHHHSRSKKKKNRKHKKKSRSSSKSDSDQSEPEYEKPAK
SSKKSRKSRSRSRSKSAGAMSPGGGAESEPISDAPSERGERKRKKKKKHRKHSSRSPSFE
EGSLAAADSRNGAELPGSRSPSPEVERKKKKKDKKKKDKRRSRSGSRGSGRSPNGHGNGG
SRSPREDDGAALSESELESQRAALLAQLNEQMMDE
NT seq
2448 nt
NT seq
+upstream
nt +downstream
nt
atgtccgttccgccggtgcagccgtttccggcgatggttccgttcagtgtgccgccgccg
acggccatggccgcgatgccggttagcgagtggaccgagcacaaggcgccggacggccgg
atgtactactacaacagcaagacgaagcaaagtttgtgggagaaaccggacgagttgaag
tccccggcggagaagctgttggccgcttgtccgtggaaggagtacaagtcggaccagggc
aaggtgtactaccacaatgtgaacacgaaggagtcgcagtgggtggcgccgttggagtac
tccgagctgaaggacaaggtcgaggcggaacggttggcggcggaagcggccaaggcagcg
gcggtcaagacgttgggcgcggtggctgcggggctgccgttgatgattccaccggtggtg
cttccggtggtttcgccggcaatggggggagattcgctcgggtcgttttcgggcgtgatg
ccgggttcggcggagaacagctcgtcggcgctggaccaggcgatggcggcgacgttggcc
gcgattgaggttcccgaggagccggcaccgtcgaagggtgcggtcgaggaggtgcctcct
gttgaggaggagccggtcattgagttcaaagacaagaaggaggcgattgaagcatttaaa
gagtttctcaaggagaagaacatcccgtcgagtgcgagttgggagcagtgcgtcaagata
tgccagaaggaccccaagtttaacgtatttaagaagctccaggagaagaagcaagcattc
aacgcttataaaacccagaagcaaaaggacgaaaaggaggaacaacggttgaaggtcaaa
cgctgcaaggaagacctggaaaagttcctcatgacctccgaaaagatgaactcgaccatg
aagttctaccgctgcgacgaactgttcgccagtctggacgtgtggaagtccgtcccggag
caggaccgccgagacatctacgaggattgcatcttcaacctgcaaaagcgcgaaaaggaa
gaatcgcgcctccttaaaaaacgcaacatgcgcgtcctcggcgaactcctcgaggccatg
accaccgtctcgtaccaaacgacctggtccgaggcccaagtcatgcttctcgaaaacgtc
tccttcaagagcgacgtcaacctgctcggcatggacaaggaggacgccctgatcgtcttc
gaagagcacatccgcgccctcgaacgcgaagaagacgaagagaaggagcgcgagaagaag
cgcaccaagcgtcaacagcgcaaaaaccgcgaccagtttctcgcccttctcgacggcctc
cacgaggaaggcaaactaacctccatgtccctttgggtcgaactctaccccatcatctcc
gccgacctgcgcttctccgccatgctcggccaaatcggttccaccccgctcgacctgttc
aaattctacgtcgaaaacctgaaagctcgcttccacgacgaaaagaaggtcatcaaggag
atcctccgcgagaaggaattcttcgtccaatccaccacgacctttgaagatttcgcgacc
gtcgtgtgcgaggacaaacgctccgccacgctggacgccggcaacgtcaaactgacctac
aactcgctcctagaaaaagcggaagccgccgagaaggaacggctcaaggaggaaacgcga
cgcattcgtaagctcgaaagtgaactcaaaagtatctggattgaggcagggttgtcggcg
gtcgatagctgggagacggcccagaagttggtggccgacctggaggtgtacgatctgtac
gagcaggaggacaaggtcgagcggttgtgggaggagtttattaaggaggcggaggattcg
tgcagtcatcaccattcgaggtccaagaagaagaagaaccggaagcacaagaagaagtcg
cggtcgtcgtccaagtcggactccgaccagtccgagcccgagtacgaaaagcccgccaaa
tcgtcgaaaaagtcgcgcaaatcccgctcccggtcacgctccaaatcggccggggccatg
tcccctggcggtggcgccgaatcggaaccgattagcgacgccccgagtgagcggggcgag
cgcaagcgcaagaagaagaagaagcaccgcaagcactcgtcgcgttcgccttccttcgag
gagggttcgcttgcggcggccgattcgcggaacggcgctgaactcccgggttcgcggtca
ccgtcgccggaggttgagcggaagaagaaaaagaaagacaaaaagaagaaggacaagcga
cgttcgcggtccggaagtcgcggcagtgggcgatccccgaacgggcacggcaacggtgga
tcccgttcgccgcgggaagacgacggtgcggcgctgtccgagtcggagctggaatcgcaa
cgggctgccctgttggctcagctgaacgagcagatgatggacgaatga
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