Culex pipiens pallens (northern house mosquito): 120432522
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Entry
120432522 CDS
T07310
Name
(RefSeq) huntingtin
KO
K04533
huntingtin
Organism
cpii
Culex pipiens pallens (northern house mosquito)
Brite
KEGG Orthology (KO) [BR:
cpii00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpii03019
]
120432522
04131 Membrane trafficking [BR:
cpii04131
]
120432522
03029 Mitochondrial biogenesis [BR:
cpii03029
]
120432522
Messenger RNA biogenesis [BR:
cpii03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
120432522
Membrane trafficking [BR:
cpii04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
120432522
Mitochondrial biogenesis [BR:
cpii03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
120432522
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Htt_N-HEAT
Htt_C-HEAT
Htt_N-HEAT_1
Motif
Other DBs
NCBI-GeneID:
120432522
NCBI-ProteinID:
XP_052562465
LinkDB
All DBs
Position
1:111604899..111616418
Genome browser
AA seq
2874 aa
AA seq
DB search
MDKLSVFSSLQKSIDTLKATGCSSKEKIHHFGLISESIVSVRSGVGSANFQNHLSSAVEC
LLAFCEESDSGVRMSAEENLNKIVRFCEGNGSIVRVQIDLYHEIKKNGNERSLRISLALF
GHYCGAIKQRKGKTFAQNLLPSIYAISKRSETQVLESLSTFLKVFTERLECYMTDGEVLK
MTEVFVEDLAAECATKRRCAAQNIDYFIAGSRCPEIYANNAFNRCIEMLLKNQGQNAALG
VLACFRGILPLVLKHSSVEKSIETLDLVLHFLKDGSHSVINAALEVISVIFGNLPAAVKQ
VLLSQDVDHRKFLLKRKTLKNSVFKINLSESMLSSRKSSTDARMDSLNPRHAGMSFLQVS
STPTKFTPGDDKSLASASDFELDSFRSMEFDNSSNFSPEKDPRSPRSTQPPDTISLKSQK
STDSIGSFINTFLTTSTSAGESVTKFFRKSFDSPVASASAHLPLADQHDDLSLESLASSQ
ISMQSSTADTIRNELLLEVDDRTETVSETLQEAAREDEDEDVTEADEVRAETPTTASIAG
AMEDIVNIGDAPVPEDDDTTPSRDLFIGTIHDQNILDYTVRLIASRFLLSGNSCGSLIPD
STVRVSVKAMSLLIVGQCVQLRPEVLLLPLEKDIPREEFDVVEILNLEDAIAEISSEAIL
EVDEGAAAAGSAEVSEVECLLEMKEDHFGECTSSTYFEYFSPMSISLDQGLTSLKSKLKL
VEENFSTMAMDSQDKLSKELDAILSQSVCSGEVARRNRKELLVVPRVITVDSGDRAGKRL
VGEGVQQMLADVMLYYDHSDQTLRGHVLQIVGYFLGVVLEKHGSLEKFLEGVDKNAELDK
FIKLDALLHVVAKGLLDEIHTVVNQALTAFDQIFAIYCRTRPIGPPPKLESSDSEFTFKP
KPSENIFNNTKLPTMTPELLINKLLLVFQNKYWLVQCKVCDAIVNLDFALLRAVLGTESA
RIVQDKCLDQLLLLIKDGDFRVRNHSGERLIGWIENLAKCGRGSRFNEGILETFVKEYVT
ASFAEPIDARRLEKPSDVKLFASRAGPVFYKLSNQLLNLGDRNQLLGIIHFLRLFVTKYN
PFDLLEVWNEFNLLNVLLSLMSEHTGTALDLTAQSDLLKICSSLMIVTMSSRTISPADNE
VIDKFIFHVLKIFNIYQHLFTNVKPVVISREKSDLFIPQKDLQLINCFGYFGNDHFYIKL
YGLLKNSFESYKITVNGDVGQKLFSLLRSTISSLWRLLEIKNITTMTNGFKFIEEVLRYL
MTFLPYEPEWCVKCTRYLLRFLFTCNFVNRTADVEYFRRSADSLSLHDSDACREFFDQYY
DFHKCKSIISTTDLGNYIKQFEQMVIACLKIYSKTSVAVQTAILELLCQLLDYSINYQLL
DSSNVFVECVLKHVELLETGTIRGSEVLIGRIIKFLVLLPHTKERSRIVDIPKIINICDN
MLANGLIRDTAIASLQVLAHEIFFLNRAVDQTNLGEHATQKEVILNMMIKFPEEVRCYGA
APTILLVERSTQSGKYEAEILNTLLGVIQEGKLVIEGDRERMIVEQTLDALGKQVLLESN
AMQNFLKIFFGLEKNKDIDECQKILYYQLILEKVLLSTEESYLMSHVKLFFNKEQSFGVD
GSGEALLTRTLNDILGRSIRSSNEVTTRLLKTMTKLRKFPTVSKRLLEKINFDGWDQVVD
HPAFFELLIGSGVDTKRLITITNKASKTVGSQEVAAELIRLLTESKPTKDHWTSDEITLL
VESHLDLLLSNFPSLLLEYVPLKEYSLLIVPNVVSAMKIDNSNIKFFSLLEKSHLKTFTT
CVDHLTNLLHATNIVTARKSALVLDAKLEQLLKAEPLESETLHQILPGDQFGRLFATFSP
DRRKRFPKLFKTALLLVRFYPAVVPPQDLLPRVDVTQLKQIATDDPWFLEQIAYHCTGPS
YTKSKNVARMLLEVNSESKLINLLSSADFNARLLREVIETGFDHMLHNFRVDCVLFNPHL
NYLKVHPMLKVALIVLVRKLDEINGTPEERWDERTFLNCARSVIGFLESLSRLEHTCLIY
VEAKFVDRFIKDNLLKSNFFEPLLIFARNCAKLVRNKIATTCLQNTTILELYLKGIDSTI
RQKHLWTELNQNDKFRDDQELYVNLSFDVIKHHLRGSPFLESYRPPEIFSDLIATRYDQV
EVYLQAILIAQYISERQLECPEEQRSLLETVRAVAIAVLKTDRFYPFAMTPGEVFNCYNL
DVDVEPLRLPAVPIDYLYELDTLEVYLKRVSIFGFSSKQQFEELFMSLLVLINREGDPDM
INYQEQYEIKGMCLRAIVELLLSCYKYPRIGFGDGKFYHVPRNPAIKCSSVGLKKLHGIQ
LLIPLNSVFYQSNLERNLLVTCTDELCAGGDNAIGTQTFGCNQFSIQYSWHAMEGLVNES
LVARNLRYFIERANLDVLSSVQLIYDIFGQLMEDFFSLVLPHLVKFCEICENRDQIRQLY
TLVLALQERVPMEDTLSQQHIIYLLCKMAALLVPSMAELTHLCTIIPTYLKSTQLYIRDA
TLAGLICLLECLVTSNTTMGGLSEELQLLRNVIVNYIVKHGIIDESSTAFSDVHTKLVWT
LNFYLIENTSRFVTDCNLLSNSVISANNILKRTTNLEIYLCILNGLERVILTNTAPRPLL
EKIEKLALDLVKLDNEMFSLAALKLLVACIYHGSAEQLEDTERSNGIVQDEPEIIIQQIE
KIEILFTKIRTTTPQGARIFGEVLCQLIRDLLPPNEILTKVFKELMLNQPNPDIIATVTH
QVFRSAIDSSYLALLQEWLLCSLPNFLSFPQINKSVWCLTVIFLSASLNQHLLKLFPEVL
SLPSYQQLNEREINNFILAARDFYRKLEPPQRAKFREVFEQSDSFVYQNLLQCL
NT seq
8625 nt
NT seq
+upstream
nt +downstream
nt
atggacaagttgtcggtgtttagcagcttgcagaaatcgatcgatactctcaaggcaacg
ggatgcagttccaaggagaaaattcaccactttgggttgatcagcgagtcgatcgtgtcg
gtgaggtcgggcgttggaagtgccaacttccagaaccacctcagttcggctgtcgaatgt
ttgctggcgttttgtgaggagtcggactcgggggttcggatgagtgcggaagagaacttg
aacaagattgttcgattttgcgaggggaacggaagtatcgttcgggttcagattgatttg
taccacgagataaaaaagaacggtaatgagcgatcgctgcgaatcagtttggccctgttt
ggccattactgcggagctatcaagcagcgaaagggtaaaactttcgcgcagaatctactg
ccgagtatttacgcgatttcgaaacgatccgagactcaggttctagagagtttgagcacc
tttttaaaggtgttcaccgaacgtttggaatgctacatgaccgatggagaagtgctgaag
atgacggaagttttcgtcgaggatctggcagccgagtgtgccaccaagcgacgttgtgcc
gcgcagaacatcgattacttcatagcggggtcacggtgtccggaaatatacgccaacaat
gcgttcaaccgatgcatcgagatgctgctgaagaaccaaggacagaacgcggctcttgga
gtgctagcttgctttcgaggaattctgccgctggtactgaagcactccagcgtagaaaag
tccatcgaaacgctcgatttggtactccacttcttgaaggacggatctcacagcgtaatc
aacgcagccctcgaggtcatcagtgtaatcttcggcaatctaccagctgcggtcaaacaa
gtcctgctatcccaagacgtagatcaccgaaagttcctgctgaagcgcaaaacccttaaa
aactccgttttcaaaatcaacctcagcgaaagcatgctcagctctcgcaagtccagcacc
gacgcccgtatggactccctgaacccacgtcacgccggaatgtccttcctgcaggtcagc
tcgacccctacaaagttcactcccggcgacgacaaatcgctcgcgtccgcgtccgacttc
gagctagactcgttccgcagcatggagttcgacaactcgtccaacttcagcccggaaaag
gacccgcgatccccgcgatccacccagcctccggacacgatatcgctgaaaagtcaaaaa
tcaaccgattccatcggttccttcatcaacacattcctcaccacgagcactagcgccggc
gaatcggttaccaagttctttcgcaagtcgtttgattcgccggtggcatcggcttcggcg
caccttccgttggcggaccagcacgacgacctgtcgctggaatcgctggccagcagccag
atctcgatgcagagcagcacggcggacacgatccggaacgagctgctgctggaggtggac
gaccgtacggaaacggtcagcgaaacgctccaggaggcggcaagggaggacgaagacgag
gacgtgacggaagcggacgaggtgcgggcggaaacgccgacgacggcttccattgcgggc
gccatggaagacatcgtcaacatcggcgacgcgcccgttcccgaggacgacgacaccact
ccttcgcgggacctattcatcggtaccatccacgatcagaacatcctggactacacggtt
cggctgatcgcttcgcggttccttctgtcgggcaacagctgtggctccctcatcccggac
tcgaccgtgcgcgtatccgtcaaggccatgtcgctgctaatcgtaggccagtgcgttcag
ctgcgaccggaagtgctgcttctgccgctcgagaaggacattccccgggaggagtttgac
gtggtggagattttgaacttggaggacgccattgccgagattagcagcgaagcgattcta
gaggttgatgaaggggctgcggcggctgggtctgctgaggtctccgaagttgagtgtctg
ctggagatgaaggaggaccactttggggagtgtaccagctcgacgtactttgagtacttt
tcgccgatgagcatcagcctggatcaggggctgacctcgctgaagagtaaacttaagttg
gtggaggagaatttcagtacgatggcgatggacagtcaggacaagctgagcaaggagttg
gacgccatattgtcgcagtcggtttgtagtggcgaggtggcgcgaagaaatcggaaggaa
ctgctggtggtgccgagggttatcacggtggacagtggagatcgtgctggcaaacggttg
gttggagaaggcgttcaacagatgctggccgacgtgatgctgtactacgatcattctgat
cagacattgaggggtcatgtgctgcagattgtgggatacttccttggagtggttctggaa
aagcatggtagcctggagaagtttttggagggtgttgacaagaacgcagagttggacaaa
ttcatcaagctggatgcactgttgcacgtagttgccaagggactcctggacgagatacat
accgtagtgaaccaagcattgacggcattcgatcagatattcgctatatattgtcgaact
cgaccaattggaccacctccaaaactagaatcaagcgattccgagttcacctttaaacca
aaacccagtgaaaacattttcaacaacacaaagttgcctaccatgactccggaacttctg
atcaacaagctcctgctggtgttccaaaacaaatactggttggttcagtgcaaggtttgc
gatgcgatcgtcaaccttgatttcgcattgctacgagcagttctcggcactgaatcggct
agaattgtacaggacaagtgcctcgatcagctgttgctactgatcaaggacggtgacttt
cgggtgcgaaatcattccggtgagcggttgattggttggattgaaaatctcgccaagtgt
gggcggggctcgcggttcaatgaaggtatcctggagaccttcgtcaaggagtacgttacg
gctagctttgcggaacccattgacgctaggaggctagagaaaccctcggacgtgaagttg
ttcgcaagccgtgctggacccgttttctacaagttgagtaaccagctgctgaaccttggc
gatcgtaatcagttgttgggtataatccacttcttgagattgttcgtcacaaaatacaat
ccgttcgatttgctggaagtttggaacgagttcaatttgctgaacgttctgcttagcttg
atgagtgaacacaccggaacagctttggatctcaccgcacaaagtgacctgttgaagatt
tgttcctccctcatgatcgtgacaatgtcatcgcgcacgatcagcccagccgacaacgag
gtgatcgacaagttcatattccacgtgctgaaaatcttcaacatctaccagcatctgttc
acaaacgtcaagccggttgtgatctcgcgcgagaagtccgatctgttcattccccagaag
gatctgcagttgatcaactgctttgggtattttggaaacgatcacttctacatcaagcta
tacggcttgttgaagaattcgttcgagagctacaagataaccgtgaatggagatgttggg
cagaagttgttcagtctgttgcgttcgacaatctccagcttgtggcgcttgttggagatt
aagaacatcacaacgatgacaaacggatttaagttcatcgaagaagtgctgcgatatctg
atgaccttcctgccgtacgagccggaatggtgtgtaaagtgtaccagatatctgctgcgg
ttcctcttcacgtgtaattttgtcaatcgaacggcggacgttgagtacttccggcgttca
gcggacagtctttcactgcacgattcggacgcctgtcgggagttctttgaccaatattac
gactttcacaagtgcaagtcgatcatttcgacgaccgatctgggaaactacatcaaacag
ttcgagcaaatggtgatcgcgtgtttgaaaatctactccaagacgagtgtggccgtacaa
accgccattttggaactgctctgtcaactgctggactacagcatcaactaccaactgcta
gactcgagcaacgtgttcgtggagtgcgtgctgaagcacgtggaactgctggaaactgga
accattcggggttcggaagtcttgatcggaagaatcattaagttcctggtcctacttccg
cacacgaaagaacgctcaaggatcgtagacattccaaagatcatcaacatctgtgataac
atgctggccaacgggttgatacgggatacggcgatcgcatcgctgcaggtattggcgcat
gaaatctttttcctgaatcgagctgtagaccagaccaaccttggcgagcatgccacgcag
aaggaggtgatccttaacatgatgatcaagtttccggaggaggtccgatgttacggagcg
gcgccgacgattttgttggttgagcgatcgacgcagtctgggaagtacgaggcggagatt
ttgaacacactgttgggggtcattcaggagggaaagctggtcattgaaggagatagagag
cggatgatagtggaacaaacgctggacgcgctgggaaaacaagttttgctggaaagcaat
gctatgcagaactttttgaaaatcttttttgggcttgagaagaacaaagacattgacgaa
tgccaaaagattttgtattatcagctaattttggagaaggtgctgctgagtacggaggag
tcatatctgatgagccacgtcaagctgttcttcaacaaggagcagtcgtttggggtggat
ggctcgggagaggctctgctgacaaggacgctgaatgacatcttgggcaggtcgatcagg
agttctaacgaggttacgacgcgactgttgaaaaccatgacaaaactacgcaagtttcca
accgttagtaagcggttactggagaagataaacttcgatgggtgggatcaagtcgttgac
catccggcattctttgaactcctgataggttccggagtagacacaaagcggttgattaca
atcactaacaaagcctcgaaaacagtaggatcacaagaggttgctgcagaattgatacgg
ttgcttacggagagtaaaccaacaaaggatcactggacttcggacgagattacgctgctt
gttgaaagtcatctcgaccttctattgtcgaacttcccctcgttgttgcttgaatacgtc
cctctcaaagagtattccttgctgattgtgcctaatgtagtctctgctatgaagattgac
aattcaaatattaaattcttctcattgctggaaaaatcacatcttaaaactttcactacc
tgtgtagaccatctaacaaacctattacacgctacaaacatcgtgaccgctcgaaaatct
gccctagtcctcgacgccaaactagaacagctgctgaaagcagaacccctcgaatccgaa
acacttcaccagatcctccctggcgaccaattcgggcgactcttcgcaacattctctccc
gatcgtcgcaagcgattcccaaagctcttcaaaaccgcccttctgctagtacgtttctac
cccgctgtggtacctccccaggatttgcttcctcgggttgacgtgacacagctcaagcag
atcgcaacggacgatccgtggtttctggagcagatcgcctaccactgcacaggaccttcg
tacaccaagtccaagaacgtcgcccgcatgctgctggaggttaactccgaaagcaaactg
atcaacctgttgtcttcggccgatttcaacgcacggcttctccgggaggtgatcgagacc
ggcttcgatcacatgttgcacaacttccgtgttgattgcgtgctgttcaacccacatctg
aactatttgaaggttcatccgatgttgaaggttgcgttgatcgtgctggttaggaagctg
gacgagataaatgggactccggaggagcgatgggacgaacgcacgtttctgaattgcgca
cgatcggtgattggctttcttgaaagtctgtcccgattggaacatacctgcttaatctac
gtggaggcgaaattcgtcgatcgtttcatcaaggacaacctgttgaagtctaactttttt
gagccactgctgatcttcgctcgcaattgtgctaagctggtgcggaacaagatcgcgaca
acttgcctacaaaacacaaccattctcgaactttacctaaaaggtatcgattccaccata
cgccagaagcatctctggacggaactgaaccagaatgacaagttccgcgacgatcaggaa
ctttacgtcaaccttagcttcgacgtgatcaagcaccatctgcgaggatcgccctttctg
gaaagctaccgtccgccggaaatcttctccgacctgattgcgacccggtacgaccaggtc
gaggtgtacctgcaggccatcttgatcgcgcagtacatatccgaacggcagctcgagtgt
cccgaagagcaacgatcgctgctggagacggtgcgagcggtagcgattgcggtgctcaag
accgatcggttctacccgttcgcgatgacccctggtgaggtgttcaactgctacaatctg
gatgtggacgtggaaccgctccgactgccggccgttccgatcgactacctgtacgagctg
gacacgctggaggtctacttgaagcgggtgagcatttttggcttctcgtcgaagcagcag
tttgaggagttgtttatgtcgctgttggttttgatcaacagggaaggcgacccggacatg
atcaactaccaggaacagtacgagatcaaaggcatgtgtttgcgggcgatagttgaactt
ctactgagttgctacaagtacccgcggataggattcggggacggcaagttctaccatgtg
cctcgtaaccctgcgatcaagtgcagttccgttggtctcaaaaagctgcacggtattcag
ctgttgattccgctgaacagcgtcttctaccagtcgaacctggagcgcaacctgctggtg
acctgtacggacgaactgtgcgccggcggagacaacgcgatcgggacgcaaaccttcggc
tgtaatcagttttcgattcagtactcgtggcatgccatggaagggctggtcaacgagtcg
ctggtggcgcggaacttgcggtactttatcgagagagctaacctggacgtgctgagttcg
gtgcagctgatctacgacatctttgggcagctcatggaggactttttctcactggtactg
ccacatctggtaaagttctgtgaaatctgtgagaaccgggaccaaatccggcagctgtac
acgctggtgctggcactgcaagagcgggtcccgatggaggatacgttgtcccagcagcac
attatctaccttctctgcaagatggccgctctgctggttccgtcaatggccgagctgacg
cacttgtgcaccatcatcccgacctacctgaagagcacccagctgtacatccgggacgcc
accctggccggactgatctgcctactggagtgcctggtcacgtccaacacgaccatgggc
ggactcagcgaagaactgcagctgttgcggaacgtgatcgtgaactacatcgtcaaacac
ggcattatcgatgagagttcaacggcgttcagcgacgtgcacaccaagttggtttggacc
cttaacttctacttgatcgagaacacttctcggttcgtgacggactgcaatctgctatcg
aatagtgtcatttcggcgaataacatactaaagaggacaacgaatcttgagatctacttg
tgcatcctgaatggtctggaacgagtgatcctcaccaacaccgcaccacgaccacttctc
gagaaaatcgagaagctcgcgctggacctggtcaagctggacaacgagatgttctcgttg
gccgccctcaagcttctcgtagcttgcatctaccacggttctgctgagcagctcgaggac
acggaacgctccaacggaatcgtccaggacgagcccgagatcataattcagcagatcgag
aagatcgaaatcctcttcaccaaaatccgcacgacgaccccgcaaggtgcgcgcatcttc
ggcgaagtcctctgccagctgatccgcgacctactcccacccaacgagatcctcaccaag
gtcttcaaagagcttatgctgaaccaaccgaacccggatattatcgccaccgtcacccat
caggtgttccgctcggccattgattcctcctacctggctctactccaggagtggctgctc
tgttccctccccaactttctctcattcccccaaatcaacaagtccgtctggtgcctaacg
gtcatcttcctgtccgcgtcgctcaaccagcatctcctcaaactgttcccggaggttctg
tcgctgccctcgtaccaacagctgaacgagcgcgaaatcaacaatttcattctggcggcg
cgcgatttctaccgcaagttggagccacctcagcgcgccaaattccgcgaggtgtttgag
cagagtgactcgttcgtgtaccagaacttgctgcagtgtctgtga
DBGET
integrated database retrieval system
