Campylobacter pinnipediorum: CPIN18020_0546
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Entry
CPIN18020_0546 CDS
T05033
Symbol
topA
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
cpin
Campylobacter pinnipediorum
Brite
KEGG Orthology (KO) [BR:
cpin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cpin03032
]
CPIN18020_0546 (topA)
03400 DNA repair and recombination proteins [BR:
cpin03400
]
CPIN18020_0546 (topA)
Enzymes [BR:
cpin01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
CPIN18020_0546 (topA)
DNA replication proteins [BR:
cpin03032
]
Prokaryotic type
DNA Topoisomerases
CPIN18020_0546 (topA)
DNA repair and recombination proteins [BR:
cpin03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
CPIN18020_0546 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim
Zn_ribbon_Top1
Toprim_4
Toprim_2
DUF1272
Lar_restr_allev
Motif
Other DBs
NCBI-ProteinID:
AQW85766
LinkDB
All DBs
Position
complement(508879..510741)
Genome browser
AA seq
620 aa
AA seq
DB search
MRSLIIVESPAKAKTIKNFLGDDYDVIASKGHIRDLPKTSFGIKIEDDKFKPEYRVSADH
SKIVKEIKELAKKADQIYLATDEDREGEAIAFHIASAIGKDANKLPRIVFHEITKNAIQN
ALSNPRVIDMDSVNAQQTRRLLDRIVGYKLSPLLNLKIQKGLSAGRVQSAALKIIVDREK
EIQAFKPVRYFSIDTKFKKDLEADLIKFQNQKIEKLTITNPDRAKLIVDTLKNDKFIVSN
IESKERKTSPQPPFMTSTLQQNASNVLGFSPKKTMMIAQNLYEGVQTNDGFMGAITYMRT
DSLNLAKEAVEAARDLIKNEFGDKYLPSKAVSYVTKSKGAQEAHEAIRPTNLNFTPTIAA
KFLEKDALRLYTLIYNRFLACQMSQSISETQNVFITSENSEFKLSGKKMVFDGFYKVYGD
LDKDKILPSLNINDELNIQSIEQTEHFTEPPSRYSEAGLVKKLESLGIGRPSTYAPTISL
LTSRDYVKVEKKQLIPNEISFIIMSVLQEHFNDIVDSEFTSNLEAKLDLIASNQADWQNV
LGDFYHPFMEKIASGKTNIKSLKVANPIGEKCPECGGELLERSGRYGKFIACGNFPKCKY
SRNIESNKQDTKETAQKNNQ
NT seq
1863 nt
NT seq
+upstream
nt +downstream
nt
atgagaagtctaataatagtagaatctcctgcaaaagcgaagacgataaagaatttttta
ggtgatgactatgacgttatagcttcaaaaggacacataagagatcttccaaaaaccagc
tttggcataaaaatagaagatgataaatttaagccggagtatagggttagtgcagaccat
tcaaaaatagtaaaagagataaaagagttagccaaaaaagctgatcaaatatacctagct
accgatgaggatagagagggagaggctattgcatttcatatagcaagtgcaataggaaaa
gacgcaaacaagctacctagaatagtctttcatgaaattacaaaaaatgccatacaaaat
gctctttcaaatccaagagtgatagatatggatagtgtaaatgcccagcaaacaagacga
cttttggataggatagttggatacaaactaagtccgttgttaaatcttaaaatacaaaaa
ggcttaagtgctggcagggttcaaagtgctgctttaaaaatcatagtggatagagaaaaa
gagatacaagcatttaaaccagttagatattttagtatagatactaaatttaaaaaagat
ttagaagccgatttgataaagtttcaaaatcaaaaaatagaaaaactaactataacaaat
cctgatagagcaaaacttatagttgatacacttaaaaatgataaatttattgtaagcaat
atagaaagcaaagagagaaagacaagtcctcagcctccatttatgacatcaacattgcaa
caaaatgcaagcaatgtccttggctttagccccaaaaagacaatgatgatagctcaaaat
ttatacgaaggcgtccaaacaaatgatggttttatgggtgcaataacatatatgagaact
gatagcttaaatctagcaaaagaggctgttgaagcagcgagagatcttataaaaaatgag
tttggagataaatatctaccaagcaaagctgtgtcttatgtgactaaatcaaaaggtgca
caagaggcacacgaggcaataagacctacaaatttaaacttcacaccaacaattgctgct
aagtttttagaaaaagatgcattaagactatacacactaatttacaatagatttttagca
tgtcaaatgagtcaaagcataagtgaaacccaaaatgtttttataacaagtgaaaattca
gagttcaaacttagtggcaaaaagatggtatttgatggtttttataaagtttatggcgat
ttagataaagataaaatcttacctagtttaaacatcaatgatgaattaaatattcaaagc
atagagcaaacagaacattttacagagccaccttcaagatactcagaagctggacttgtt
aaaaagttagaaagtcttggcataggaagaccatctacttatgcacctacaatatcactt
ctaacatcaagagattatgtaaaagtagagaaaaaacagcttataccaaatgaaatttca
tttattataatgagtgttttgcaagagcattttaacgatatagtagatagcgaatttact
tccaacctagaagcaaaacttgatcttatagcatcaaatcaagctgattggcaaaatgtt
ttaggtgatttttatcatccttttatggaaaaaatagcttcaggcaagacaaatataaaa
agcttaaaagttgcaaatccaataggtgaaaaatgtcctgaatgcggaggggaactctta
gaaagaagtggcagatacggtaaatttatcgcttgtgggaatttccctaaatgcaagtat
tcaagaaatatagaatctaacaaacaagatactaaagaaaccgcacaaaaaaacaaccaa
taa
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