Campylobacter pinnipediorum: CPIN18020_0705
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Entry
CPIN18020_0705 CDS
T05033
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
cpin
Campylobacter pinnipediorum
Pathway
cpin03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cpin00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CPIN18020_0705
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpin03019
]
CPIN18020_0705
Messenger RNA biogenesis [BR:
cpin03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
CPIN18020_0705
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HD
RNase_Y_N
KH_1
HDOD
KH_2
HD_3
KH_KhpA-B
DUF4945
Motif
Other DBs
NCBI-ProteinID:
AQW85915
UniProt:
A0A1S6U728
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All DBs
Position
665638..667191
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AA seq
517 aa
AA seq
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MIEIFVGLGAGAIGAGAGYLVAKKINDANYNIFLEQAKAKAKAIEYEAEIILKNSKISVQ
EAEFEAKKKYDEKTVKLQKDYTVKFDELSKKEQILSNEKELLNSDKLVVEREKNEAKITY
EEGVSLKNTYKDKVAEALKVLEHAAGLTEDEAKDIVLKKVEENSRAEIAHIVRKYEEEAK
KEAKKKANYILAQATSRFAGEFAAERLINVVNIKNDELKGRIIGKEGRNIKTLEMVLGVD
IIIDDTPNAIILSSFNLYRRAIATRVIELLVEDGRIQPARIEDLYKKVTEEFEQSIQEEG
ENIAMDLGLNKIHPEIIKLIGKLKFRASYGQNALAHSLEVAHLAGIIAAEIGGDEKLAKR
AGILHDIGKALTHDFEGSHVDLGADVCKRYKEHPVVINAIYAHHGHEEALSIESAAVCAA
DVLSAARPGARREVLESFLKRVEEIENIAKTKDGIKQAYAINAGREIRVIANAKLVNDDE
AVLLSKEIASEIEDKVQYPGEIKVNVIRETRAINYAK
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atgatagagatttttgtaggattgggggctggtgccattggcgctggagcaggatatctt
gtagctaaaaagataaatgatgcaaattataatatttttttagaacaagcaaaagcaaaa
gcaaaagctatagaatatgaagctgaaattattttaaaaaattcaaaaatttcagttcaa
gaagctgaatttgaagctaaaaaaaaatatgatgaaaaaacagtaaagcttcaaaaagac
tatactgtaaaatttgatgaactaagtaaaaaagagcaaattttgtcaaatgaaaaagag
cttttaaatagtgataaattagtagttgagagagaaaaaaatgaagctaagataacttat
gaagagggagttagcttaaaaaatacctataaagataaagttgcagaggcattaaaggtt
ttagaacacgctgctggtcttacggaagatgaagccaaagatatagtcttaaaaaaagta
gaagaaaatagtagagcagaaatagctcatatagtaagaaaatatgaagaagaagctaaa
aaagaggctaagaaaaaagcaaattatatactagcacaagctacttcgcgttttgctgga
gagtttgcagctgaaaggcttattaatgttgtcaatatcaaaaacgatgagttaaaaggt
agaataataggcaaagagggtagaaatataaagactctggagatggttttaggtgttgat
ataatcatagatgatactccaaatgctattatacttagtagttttaacctttaccgtaga
gctattgctactagggttattgaattattggttgaagatggaagaatacaaccagcaaga
atagaagatttgtataaaaaagtaactgaggaatttgagcaaagcatacaagaagagggt
gaaaatatagcaatggatcttggtcttaacaaaattcatccagagataattaagcttata
ggaaagcttaaatttagagctagttatggtcaaaatgcgttagcgcatagtcttgaagta
gcacatcttgctggaattatagcagcagaaatcggtggcgatgaaaaacttgcaaaaaga
gccggtatacttcacgatataggcaaagctttaacacatgattttgaaggatctcacgtt
gatttgggtgctgatgtttgcaagagatacaaagaacacccagttgttataaatgctatt
tatgcacatcacggacacgaagaagctttaagtatagaaagtgcagctgtttgcgcggca
gatgttttaagtgcagcgagaccaggtgctagaagagaagttttagaaagctttttaaaa
cgtgtggaagagatagaaaacatagcaaaaacaaaagatggcataaaacaagcttatgct
atcaatgctggtcgtgaaattcgcgttatagcaaatgctaaactagtaaatgatgatgaa
gcagttttgttatcaaaagagatagcatccgagatagaggataaagttcaatatcctggt
gaaattaaagtaaatgtaataagagagacaagagctatcaactatgctaaataa
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