Campylobacter pinnipediorum: CPIN18020_0729
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Entry
CPIN18020_0729 CDS
T05033
Symbol
rep
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
cpin
Campylobacter pinnipediorum
Pathway
cpin03420
Nucleotide excision repair
cpin03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cpin00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CPIN18020_0729 (rep)
03430 Mismatch repair
CPIN18020_0729 (rep)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cpin03400
]
CPIN18020_0729 (rep)
Enzymes [BR:
cpin01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CPIN18020_0729 (rep)
DNA repair and recombination proteins [BR:
cpin03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CPIN18020_0729 (rep)
MMR (mismatch excision repair)
Other MMR factors
CPIN18020_0729 (rep)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_11
AAA_12
DEAD
AAA_30
ResIII
DUF1758
Motif
Other DBs
NCBI-ProteinID:
AQW85939
LinkDB
All DBs
Position
693045..695078
Genome browser
AA seq
677 aa
AA seq
DB search
MPLSRLNQEQYTAATAPFGANLVIASAGTGKTSTIVARIAHLLNLGCDPQKILLLTFTNK
AATEMIERLNRYFDKSITSSITSGTFHSVSYTLLKKIGKNVTLKQPSELKMLLKSIVEKR
KFYHLSDIKPYGGAYLYDVYSLYQNSSQDDNFHDYFVAKNSEQAVYAEIYEDILKEFELE
KEKFGYVDFNDLLIKMRDELKNNIDIKYDEILIDEYQDTNTLQGSLIDAFNTKSLFCVGD
FDQSIYAFNGANIEIIGSFKDRFKDANIYALNVNYRSSSSILALANKVISNNPRLYEKKL
VVSREGKFKNPTLLVYNELFDQYTNIADIISLSPYDRENIAIIFRNNSSADGIEVALKEK
GINSKRKGGISFFESKEIKSLIDLIGIYVNPKDIMAFIHIFEYAKGIGNALSKDIFDTLI
KLGHGDLVKGLLKPDSTVDIKSKKVRNYQLGLFDDFDDISDVNKFKNLNFDSEFLSHPVL
KKEKLSEDGANFLYELLNLLKKLQNLNDPYFFIKHIQNSKIFYFIVDVLSTKRATLKNGN
VDLTLKEEIQEKIFQKTNVLLELSKKYNNVEKFYNFITLGSNEMSEGQGVSLLSVHASKG
LEFEQVFVVDLAQNRFPNLKLMSMGGSLEEERRLFYVAVTRAKDELYLSYARFDKMKKVN
YQPSCFLVEAGMAKESY
NT seq
2034 nt
NT seq
+upstream
nt +downstream
nt
atgccactttctagactaaatcaagagcaatatactgctgctactgcaccttttggtgca
aatttagttatagctagtgctggaactggaaaaacttctactatagtggctagaatcgca
catcttttaaatttgggttgtgatcctcaaaagatactgcttttgacttttacaaataaa
gctgctacagagatgatagaaaggttaaatcgttattttgataaaagtataacttcatct
ataacatcaggcacatttcattcggtatcttataccttacttaaaaaaattggaaaaaat
gtaacattaaaacagccaagtgagctaaaaatgcttctaaaaagcatagtagaaaagcga
aaattttatcatttaagcgacattaaaccatatggtggagcttatttgtatgatgtttat
tcactttatcaaaactcatcacaagatgataattttcacgattattttgtagcaaaaaat
agcgaacaagctgtttatgctgaaatttatgaagatattttaaaagaatttgaattagag
aaagagaaatttggctatgttgattttaatgatttgcttattaaaatgagagatgaactt
aaaaataatatagatataaaatatgatgaaattttaatagatgaatatcaagatacaaat
actcttcaagggtctttaatagatgcttttaatacaaaaagtctattttgtgttggtgat
tttgatcaaagtatttatgcttttaatggggcaaatatagagatcataggttcttttaaa
gatcgttttaaagatgcaaatatatatgctttaaatgttaattatcgctcaagctcttct
atacttgcacttgcaaataaggttatatcaaacaatcctagactttacgaaaaaaagctg
gttgtgagtagggaaggtaagtttaaaaatccaacattgcttgtttataatgagcttttt
gaccaatacacaaacatagcagatattatctctttatcgccttatgatagagaaaatata
gctattatttttagaaataactcatcagcagatggcattgaggtagctttaaaagaaaaa
ggtataaattcaaaaagaaaaggcggtattagcttttttgaaagtaaagagataaagtct
ttgattgatttgattggaatttatgtaaatccaaaagatattatggcatttatacatata
tttgaatatgcaaaaggtataggaaatgctttgagtaaggacatttttgatactttaatt
aagcttgggcatggtgatttggtaaaagggcttttaaaaccagacagcactgtggatata
aaaagtaaaaaagttcgcaattatcagcttgggctttttgatgactttgatgatatttct
gatgttaataaatttaaaaatttaaactttgatagtgaatttttgtctcatccggtttta
aaaaaagaaaaattaagcgaagatggtgccaactttttatatgaacttttaaatttatta
aaaaaattacaaaatttaaatgatccatatttttttataaaacatatacaaaatagtaaa
attttctattttatagttgatgttttgtctacaaaaagggcaactttaaaaaatggaaat
gttgatttgactcttaaagaagagatacaagaaaagatatttcaaaaaacaaatgtcttg
cttgagcttagtaaaaaatataataatgttgaaaaattttataattttataacacttggt
agtaatgaaatgagtgaagggcagggggttagtttgcttagtgttcatgctagtaaggga
cttgagtttgaacaagtttttgtcgttgatttagcacaaaatagatttccaaatttgaaa
ttaatgagtatgggtgggagtttggaagaagaaagaaggttgttttatgttgctgttact
agggcaaaagatgagctttatctgagttatgcgagatttgacaaaatgaaaaaagtaaac
tatcaaccaagctgttttttggttgaagccggaatggcaaaagaaagttattag
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