Campylobacter pinnipediorum: CPIN18020_0931
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Entry
CPIN18020_0931 CDS
T05033
Symbol
phrB
Name
(GenBank) deoxyribodipyrimidine photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
cpin
Campylobacter pinnipediorum
Brite
KEGG Orthology (KO) [BR:
cpin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cpin03400
]
CPIN18020_0931 (phrB)
Enzymes [BR:
cpin01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
CPIN18020_0931 (phrB)
DNA repair and recombination proteins [BR:
cpin03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
CPIN18020_0931 (phrB)
Prokaryotic type
CPIN18020_0931 (phrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
DUF4250
Motif
Other DBs
NCBI-ProteinID:
AQW86134
UniProt:
A0A1S6U7M6
LinkDB
All DBs
Position
902108..903445
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AA seq
445 aa
AA seq
DB search
MKQILWFRRDLRVTDNAILANANKDVLPIFIFDKNILEKLPNDDKRVTFIYKSVLNLKTN
LKKIGLDLAIFYDNPKSVFTKLKKYGFDEILCSVDFDSYSISRDKEIEKILPLNRYLDSF
ILNPNEHLKKDQTPYKVFTPFYKSLDPITSSSKISTFELKNKLNKIDFDYSFIPSLEMMG
FIEQKLPDFLEKKPAELLNTFKEKIEKYDKARDYFYMDDTSKISVHLRFGLISPKEVFNY
LKSEQNLNSESFIRELFWREFYNYILFHFPSSQTQNFQDIKINWSDNKEHFEKWCRGETG
VPIVDAAMRHLNNTGTMHNRLRMITASFLTKNLFIDWKKGEKYFALKLLDYEASSNIGSW
QWSASTGTDANPYFRVFNPYSQSKKFDPDAIFIKKVIPELRDVNPKLLHIENGLLEDIFI
KYPKSIVDITNSRRQAIQNFKKAKN
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
ttgaaacaaattctttggtttagaagagatttaagggtaacagataatgctattttagcc
aatgcaaacaaagatgttttgcctatatttatttttgataaaaatattttagaaaaactt
ccaaatgatgataaaagagtaacttttatatataaatctgttctaaatttaaaaacgaac
cttaaaaaaatagggcttgatttggctattttttacgataatcctaaaagtgtttttaca
aagttgaaaaaatatggatttgatgaaattttatgctctgttgactttgattcatactcc
ataagcagggataaagagatagaaaaaatactgccattaaatagatatttggactctttt
atacttaatccaaatgagcatttaaaaaaagatcaaacaccatataaagtttttacacct
ttttataaatctttggatccaataacttcttcaagcaaaataagcacttttgaattaaaa
aataaacttaacaaaatagattttgattatagctttataccaagtcttgaaatgatgggc
tttatagagcaaaaacttcctgattttttagaaaaaaaacctgctgaactgctaaatact
tttaaagaaaaaatagaaaaatatgacaaagctagggattatttttatatggatgacaca
tctaaaatatcagttcatctaagatttgggctaatttcaccaaaagaggtttttaattat
ttaaaatccgaacaaaacttaaacagcgaatcttttataagagagttgttttggagagaa
ttttataactatatattgtttcattttccaagcagtcaaacacaaaactttcaagatatt
aagataaactggagcgacaataaagaacattttgaaaaatggtgcaggggagaaacaggt
gttcctatagtagatgccgcaatgagacatttaaacaacacaggaacaatgcataataga
ttaagaatgataacggcatcttttttaactaaaaatctttttattgactggaaaaaaggt
gagaagtattttgctttaaagctcctggattatgaggctagctcaaatataggttcgtgg
caatggagtgctagtacaggcaccgatgctaatccatattttagagtttttaacccatat
tctcaatcaaaaaaatttgatcccgacgcgatatttataaaaaaagttatacctgagcta
agagatgttaatccaaagctactgcatatagaaaatggtcttttggaagatatatttata
aaatatcctaaaagtatagttgatataacaaactctagaagacaagcaatacaaaatttc
aaaaaagctaaaaattaa
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