Campylobacter pinnipediorum: CPIN18020_0998
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Entry
CPIN18020_0998 CDS
T05033
Symbol
dnaX
Name
(GenBank) DNA polymerase III, gamma and tau subunits
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
cpin
Campylobacter pinnipediorum
Pathway
cpin03030
DNA replication
cpin03430
Mismatch repair
cpin03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cpin00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CPIN18020_0998 (dnaX)
03430 Mismatch repair
CPIN18020_0998 (dnaX)
03440 Homologous recombination
CPIN18020_0998 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cpin03032
]
CPIN18020_0998 (dnaX)
03400 DNA repair and recombination proteins [BR:
cpin03400
]
CPIN18020_0998 (dnaX)
Enzymes [BR:
cpin01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CPIN18020_0998 (dnaX)
DNA replication proteins [BR:
cpin03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CPIN18020_0998 (dnaX)
DNA repair and recombination proteins [BR:
cpin03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CPIN18020_0998 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA
AAA_22
RuvB_N
AAA_14
DciA
AAA_5
AAA_assoc_2
AAA_19
AAA_24
Chordopox_E11
AAA_30
ResIII
AAA_16
L31
Motif
Other DBs
NCBI-ProteinID:
AQW86199
LinkDB
All DBs
Position
966872..968527
Genome browser
AA seq
551 aa
AA seq
DB search
MQALALKYRPKNFSELIGQEAVSKSLTYALKDQRISHAYLFSGLRGSGKTSSARIFSKAL
VCEQGPTPTPCEQCAHCKMANESRHMDIIEIDAASHRKIDDIRELIEQTKYNPASARYKI
FIIDEVHMLTKEAFNALLKTLEEPPPYVKFILATTDPLKLPATILSRTQHFRFKQINKYA
IQKHLEYILSNENISYEKEAIEILARSGSGSLRDTLTLLDQAIIYSNNKITQDSVVEMLG
LLEPQRIEEIYNIVLSSDKNRLKELIMELESYEAEMIIDELITNLKGKFLNNDPRFSLLV
YERFFRIFAQAKGMLNTTNDNNFVLSIMLFMMIEALNLQTIDEAISTQKQQTQQPIIQTQ
TIQEIKPENIKKEEKPKDVYTVFLEKIYYRDFDLGECLSKNTKFVSYENNVLSITSSASG
NDQMLLRNSSKIIMQILKANFGEKATIKIVPTSKEAIKEDVEIQKVQDTKQEVEKNNNLS
SLLDEELARLDVKEQVPIKIAQKSETKLSIQDEILSLNANKTKEELERNRQENLIREAKR
LFGEPEISKIQ
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
ttgcaagcactagcattaaaatatcgtccaaaaaatttcagtgagcttataggacaagaa
gctgtaagcaaaagtctaacttatgctttaaaagatcaaagaataagccacgcttatctg
ttttcaggacttagaggaagtggaaaaacttcaagtgctaggatattttcaaaagctttg
gtttgtgaacaagggccaactccaacaccttgcgaacagtgtgcgcactgcaaaatggca
aatgaatcaaggcatatggacataatagaaatagatgctgcaagtcatagaaaaatagat
gatataagagagcttatagagcaaacaaaatacaaccctgcatctgcaagatataaaatt
tttatcatagatgaggttcatatgctaacaaaagaggcatttaatgccctgcttaaaaca
cttgaagagccacctccttatgttaaatttatccttgcgaccacagatccattaaaacta
ccagcaactattttatcaagaactcaacattttagatttaaacagataaacaaatatgct
attcaaaaacatcttgaatacatactatcaaatgaaaatataagctatgaaaaagaggcg
attgaaattttagctcgtagtggatcaggctctttaagagataccttaacactacttgat
caagccataatctatagcaataacaaaataacacaagatagtgttgttgagatgcttgga
cttcttgaaccacaaaggatagaagagatatacaatatagttttaagttctgataaaaac
agactaaaagagcttataatggagcttgaatcatacgaagctgagatgattatagatgag
cttataacaaacctaaaaggcaagtttttaaacaacgaccctagattttcactacttgtt
tatgagagattttttagaatttttgcacaagctaaaggtatgctaaatacaacaaatgac
aataactttgtattaagtataatgctttttatgatgatagaagcattaaatttacaaacc
atagatgaagctataagcacacaaaaacaacaaacacaacaacctataatacaaactcaa
acaatacaggaaataaaacctgaaaatatcaaaaaagaagaaaaaccaaaagatgtctat
actgtatttttagaaaaaatttattatagggattttgatcttggagagtgtttatcaaaa
aatacaaaatttgttagttatgaaaacaatgtccttagtataacatcaagtgctagcgga
aatgatcaaatgcttttaagaaatagctcaaagataataatgcaaattttaaaagcaaat
tttggagaaaaagcaaccataaaaatagttccaacatcaaaagaagctatcaaagaagat
gtagaaattcaaaaagtgcaagatacaaagcaagaagtagaaaaaaataataatctatca
agcttattagatgaagaactagcaagactagatgtaaaagaacaagtgcctataaagata
gctcaaaaatcagaaacaaaactaagtatacaagatgaaattctaagcctaaatgcaaac
aaaacaaaagaggaacttgaaagaaatagacaagaaaatcttatcagagaggcaaaaagg
ctatttggcgaaccagaaatttcaaaaatacaataa
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