Campylobacter pinnipediorum: CPIN18020_1110
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Entry
CPIN18020_1110 CDS
T05033
Symbol
uvrB
Name
(GenBank) UvrABC nucleotide excision repair complex, subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
cpin
Campylobacter pinnipediorum
Pathway
cpin03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cpin00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CPIN18020_1110 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cpin03400
]
CPIN18020_1110 (uvrB)
DNA repair and recombination proteins [BR:
cpin03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CPIN18020_1110 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
CPIN18020_1110 (uvrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
Helicase_C
UvrB
ResIII
UVR
DEAD
Kinesin
UB2H
SWI2_SNF2
AAA_30
Microtub_bd
Motif
Other DBs
NCBI-ProteinID:
AQW86304
LinkDB
All DBs
Position
complement(1091321..1093300)
Genome browser
AA seq
659 aa
AA seq
DB search
MSDFKISSKFKPGEDQKKAISSIVKSIKGGNKYNTLLGVTGSGKTFTMANVIANLKMPTL
IMTHNKSLAAQLYSEFKGFFPKNHVEYFISYYDYYQPEAYIPRSDIYIEKDSSINDELER
LRLSTTASLLSFDDVIVIASVSANYGLGDPSEYQGMIQYLNVGDEISQKKLLNRLVDMGY
TRNDSFFDRGNFRVNGDVVDIYPAYWGDEALRVEFFGDEIEQMYHFEVLDNKKLKDISKF
TLYATSQFIVREDRLKTAIKGIEDELNDRLEFYQKEGKLVEMQRLKQRVEFDLEMLSSTG
ICKGVENYARHLTGLKSGATPYTMFDYFELLNGGEFLVIVDESHVSLPQFRGMYAGDRSR
KETLVEYGFRLPSALDNRPLKFDEFINKNANFLFVSATPNELEVELSKGHVYEQILRPTG
LLDPIIDIKDSDNQVETLYDMAKEVIARKERVLITVLTKKMAEELSRYYTELGLMVKYMH
SDIDAIERNELIRGLRNGDYDILIGINLLREGLDLPEVSLIAIMDADKEGFLRSRTSLIQ
TMGRAARNVNGRVVMFCKKITKSMQEAIDITTQRRKLQDEYNKINGITPKSATRNLEDSL
HQNDDANLYTKAKKLEKMPAIERAKIIKELKKQMFEAANALEFEKAAAIRDEIAKLRQI
NT seq
1980 nt
NT seq
+upstream
nt +downstream
nt
ttgtctgattttaaaatttcatcaaaatttaagccaggagaagatcaaaaaaaggctata
agttcgatagtaaagagtataaaaggtggaaataaatacaatacgcttcttggtgtaact
ggaagcggtaaaacttttactatggcaaatgttattgcaaacttaaaaatgccaacacta
ataatgactcataacaaatcattggccgctcaactttatagtgaatttaagggattcttc
ccgaaaaatcacgttgagtattttataagttattatgattattatcaacctgaagcttat
ataccaagaagtgatatttatatagaaaaagatagctctataaatgatgagcttgaaaga
cttaggcttagcacgacagctagtttgcttagttttgatgatgttattgttatagcttcc
gtttctgccaactatggccttggtgaccctagtgagtatcaaggtatgattcaatacctt
aatgttggtgatgagataagtcaaaaaaagctcttaaacaggcttgttgatatgggttat
acaagaaatgattctttttttgatcgtggaaattttagagtcaatggcgatgttgtggat
atttatcctgcctattggggtgatgaagctttgagggttgagttttttggtgatgagata
gaacaaatgtatcattttgaagtcttggataataaaaagctaaaagatatttctaaattt
accctttatgcaacaagtcaatttatagttagagaagatagattaaaaacagcaattaag
ggcatagaagatgagcttaacgataggcttgaattctatcaaaaagagggcaagcttgta
gaaatgcaacgcctaaaacaaagggttgagtttgatttggagatgctttcttcaactggt
atttgtaagggtgttgaaaattatgcaaggcatcttacgggacttaaaagcggtgctact
ccttatacgatgtttgattattttgagcttttaaatggtggtgagtttttggttatagtt
gatgaatctcatgttagtctgccacaatttagaggcatgtatgctggcgatagaagtaga
aaagagactcttgtagagtatggatttaggttaccatcagctcttgataaccgccctttg
aaatttgatgagtttataaataaaaatgcaaattttttgtttgtatctgctactccaaat
gaactagaagtagaactttcaaaaggacatgtttatgaacaaatactaagacctacagga
ttgctagatcctattatagatatcaaagatagtgataatcaagttgaaactttatatgat
atggctaaagaggttatagctcgtaaagagagggttttaatcactgttctaacaaaaaaa
atggcagaagaattaagtagatattatactgagcttggacttatggtcaagtatatgcac
tctgatatagatgctattgaaagaaatgagcttattcgtgggcttaggaatggagattat
gatattttaataggtataaatttattaagagaaggacttgatctgccagaagtaagcttg
atagcgataatggatgccgacaaagaaggatttttgcgttcaagaactagtcttatacaa
actatgggtagggcagcaagaaatgtgaacggaagagttgttatgttttgtaaaaaaatt
acaaaatcaatgcaagaagcaatagacataaccactcaaagaagaaaactacaagatgaa
tataataagataaatggtataactccaaaaagtgcaacaagaaatttagaagatagtttg
catcaaaatgatgatgcaaatttgtatacaaaagctaagaaattagaaaaaatgccagct
atagaaagagctaaaataataaaagagcttaagaaacagatgtttgaagcagcaaatgcg
cttgaatttgaaaaagcagctgctatccgcgatgagatagcaaagcttagacaaatataa
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