Campylobacter pinnipediorum: CPIN18020_1161
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Entry
CPIN18020_1161 CDS
T05033
Symbol
ybbB
Name
(GenBank) tRNA 2-selenouridine synthase
KO
K06917
tRNA 2-selenouridine synthase [EC:
2.9.1.3
]
Organism
cpin
Campylobacter pinnipediorum
Brite
KEGG Orthology (KO) [BR:
cpin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cpin03016
]
CPIN18020_1161 (ybbB)
Enzymes [BR:
cpin01000
]
2. Transferases
2.9 Transferring selenium-containing groups
2.9.1 Selenotransferases
2.9.1.3 tRNA 2-selenouridine synthase
CPIN18020_1161 (ybbB)
Transfer RNA biogenesis [BR:
cpin03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
CPIN18020_1161 (ybbB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rhodanese
RsgA_GTPase
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AQW86354
LinkDB
All DBs
Position
complement(1142530..1143543)
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AA seq
337 aa
AA seq
DB search
MSLVELDIDNWLKNRDKFDLIIDARSPSEFAYSRIKGAINLYVLNDKEHNEIGTLYKQNR
SLAKVLGARYVCINTSEHLPKIYETAKVGSLIGVYCSRGGMRSNSISQILSMIGYRVERL
IDGYKSYRKNVLDELEKPIDLKFITLFGNTGSSKTKLIRSLQPSLDLEHIANHLGSVFGE
INGKQPSQKEFEDDLFEELILLKDKKACFIEGESRRIGSLTVPSSLHTSMRSGVNVEIVA
SLENRVECIMKDYKSVDSKFFYSCMKKISPFISKEARDDAINAYENNDIHKVCEILLVKY
YDKVYKKPQKIDYTINSDDFELAKSELMQIYNKQLKL
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
gtgagtttagttgaattagatatagataattggttaaaaaatagagataaatttgacctt
attattgatgctagaagtcctagtgagtttgcgtattctcgtataaaaggtgctataaat
ttatatgtattaaatgataaagaacataatgaaataggcactctttataaacaaaataga
tctttagcaaaggttcttggcgctagatatgtttgtataaatacaagcgaacatttgcca
aagatatacgagacagcaaaagttgggtctcttataggtgtttattgctcaagaggagga
atgcgttctaactctatttcgcaaattttaagtatgattggttatagggttgaaagactt
attgatggatataaatcatatagaaaaaatgttttggatgagcttgaaaaacctattgat
ttgaaatttataacactttttgggaataccggaagtagcaaaaccaagctcataagatct
ttacagccatctttggatttagaacatatagcaaatcatttaggctctgtttttggtgag
ataaatggaaaacagcctagtcaaaaagagtttgaagatgatttatttgaagagcttatt
ttactaaaagataaaaaagcatgttttatagaaggtgagagtaggcgtataggttcttta
actgttccttctagtttgcatacttctatgagaagtggtgtaaatgttgagatagtggct
agtcttgaaaatagagtagagtgcattatgaaagattataagagtgtagatagtaagttc
ttttactcttgtatgaaaaaaattagcccttttatatcaaaagaggcaagagatgatgct
ataaatgcttatgaaaataatgacatacacaaggtttgcgagatactcttggttaaatac
tatgataaagtttacaaaaagccacaaaagatagattatactataaattcagatgatttt
gaactggcaaaatcagagcttatgcaaatctacaataaacaattaaaattataa
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