Campylobacter pinnipediorum: CPIN18020_1231
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Entry
CPIN18020_1231 CDS
T05033
Symbol
pnp
Name
(GenBank) polynucleotide phosphorylase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
cpin
Campylobacter pinnipediorum
Pathway
cpin03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cpin00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CPIN18020_1231 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpin03019
]
CPIN18020_1231 (pnp)
03016 Transfer RNA biogenesis [BR:
cpin03016
]
CPIN18020_1231 (pnp)
Enzymes [BR:
cpin01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
CPIN18020_1231 (pnp)
Messenger RNA biogenesis [BR:
cpin03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
CPIN18020_1231 (pnp)
Transfer RNA biogenesis [BR:
cpin03016
]
Prokaryotic type
tRNA degradation factors
CPIN18020_1231 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
KH_1
S1
S1_2
Motif
Other DBs
NCBI-ProteinID:
AQW86422
UniProt:
A0A1S6U8J9
LinkDB
All DBs
Position
complement(1203675..1205849)
Genome browser
AA seq
724 aa
AA seq
DB search
MQYSIEVNNQIEIFDLNKVAKQASGAVLLRVKNTVVLATVAREDTLVEEDFLPLTVQYIE
KSYAAGKIPGGYIKRETKPGDFETLTSRIIDRSLRPLFPKGYAYPTQIVVMVLSADPEVD
LQVVGLNAASVALYLSDIPVNRPVCGVRVGYINDEFIINPTNSELKTSALDLYVAGTKDE
LLMIEMRSMPQLNDELMPAVDSCVGVDFAFKQNMNEFSEDKMVEAIDFAGKAILRATRAY
EEAFSKHKKEDADLELKPEILNDEVAIYIDKNYKDDVKNAINQMAKSERASELGNIAKRI
LSDDEATQKGWDEKLINNVLSKYKKKIVREQIINESIRADGRKLNEVRPISIETNILPNV
HGSCLFTRGQTQALVVTTLGTDSDAQMYDMLTENTASVEKFMFNYNFPGFSVGEASPLKA
PGRRELGHGNLAKRALAPSIDINSAYTLRVVSEILESNGSSSMASVCGGSLSLRAAGVDT
IKLVAGIAMGLVFEDDKHAVLTDIMGLEDHDGDMDFKVAGTFDGITALQMDIKLGGISLD
VLREALYQAKQGREHILKLMQKADEEIVINDAILPKMELFKIEPSKIVDIIGQAGKTIKE
IIERFGVAIDLDREKGEVKISGNSKNSVDGAKDYIIELTSKENKFNRKSNDRRDNHRQKP
VFNIGDEFDGKVKSVVDFGVFVELKDGVDGLLHKSKIQNPLNVGDIVRVVVSEQKGSKVS
LSLV
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atgcaatatagtatagaagtaaataatcagattgaaatttttgatttaaataaggttgca
aaacaagcatctggggcggtgctgttacgtgttaaaaatactgttgttctggcaactgtg
gcaagagaagatactttggttgaagaagattttttaccacttacggttcaatatatagaa
aaaagttatgctgctggtaaaatacctggtggttatataaaaagagagacaaaaccaggt
gattttgaaacattaacatcccgtattattgataggtctctaagacctttgtttccaaaa
ggttacgcatatcctactcaaatagttgtaatggttttatcagctgatcctgaagttgat
cttcaagttgttgggctaaatgctgcaagtgttgctttatatcttagtgatattcctgta
aatagaccagtttgcggcgttagggtgggttatataaatgatgagtttattattaatcca
acaaactcagagcttaaaacaagtgctttggacctttatgtggctggaacaaaagatgag
cttttgatgatagaaatgagaagtatgcctcaacttaatgatgaattaatgcctgctgtt
gattcttgtgttggtgttgattttgcttttaagcaaaatatgaatgaatttagcgaagat
aaaatggttgaggctatagattttgccggcaaagctatacttcgtgctacaagagcatat
gaggaagcttttagcaagcataaaaaagaagatgctgatttggaattaaagccagagata
ttaaatgatgaagtagctatttatatagataaaaattataaagatgatgttaaaaatgct
ataaatcaaatggctaaaagcgagcgtgctagtgaattaggaaatatagctaaaagaatt
ttgagtgatgatgaagctactcaaaaaggttgggatgaaaagcttataaataatgtttta
tcaaaatataaaaagaaaatagttagagagcaaattataaacgaaagcattagggctgat
ggtagaaagcttaatgaagttagaccaattagtatagaaacaaatattttacctaatgtt
catggctcttgtttatttacaagagggcagactcaagctcttgttgttacaacacttgga
acagactctgatgctcaaatgtacgatatgctaacagaaaatacagcttctgttgaaaaa
tttatgtttaattataattttccaggatttagtgtcggtgaagctagccctttaaaggct
cctggaagaagagaacttggtcatggaaatttagcaaaaagagccttagcgcctagtata
gatataaactcagcatatactttaagggttgtttctgaaattttagagagtaatggttct
agttctatggctagtgtttgcggtggttcgttatctcttcgtgcagctggtgttgataca
ataaagctagttgctggtatagcaatgggacttgtttttgaagatgataagcatgctgtt
ttaactgatataatgggtcttgaagatcatgatggagatatggactttaaagttgctggt
acatttgatggtataacagctcttcaaatggatataaaacttggcggcattagtcttgat
gttttaagagaagctttatatcaggctaagcaaggtagagagcatatacttaaattaatg
caaaaagcagatgaagaaatagttataaacgatgcaatacttcctaaaatggaacttttt
aaaatagagcctagcaagatagttgatataatcggacaagctggaaagacaatcaaagaa
atcattgaaagatttggtgttgctatagatttggatagagaaaagggtgaagtaaaaatt
tctggaaatagtaaaaatagtgtagatggtgctaaagattatattatagaattaacttct
aaagagaataaatttaatagaaaatcaaacgacagaagagacaatcatagacaaaaacca
gtatttaatataggtgatgagtttgatggtaaagtaaaaagcgttgttgattttggtgtg
tttgttgaattaaaagatggtgttgatggacttttgcataaatccaaaatccaaaatcct
ttaaatgttggagatattgtgagagttgtcgtaagcgaacaaaaaggctcaaaagtatct
ttatcattggtttaa
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