Campylobacter pinnipediorum: CPIN18020_1376
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Entry
CPIN18020_1376 CDS
T05033
Name
(GenBank) ABC transporter, ATP-binding/permease protein
KO
K12541
ATP-binding cassette, subfamily C, bacterial LapB
Organism
cpin
Campylobacter pinnipediorum
Pathway
cpin02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
cpin00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
CPIN18020_1376
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cpin02000
]
CPIN18020_1376
02044 Secretion system [BR:
cpin02044
]
CPIN18020_1376
Transporters [BR:
cpin02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
CPIN18020_1376
Secretion system [BR:
cpin02044
]
Type I secretion system
Adhesin protein transporter
CPIN18020_1376
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
SMC_N
AAA_21
AAA_15
AAA_29
AAA_23
Peptidase_C39
KH_2
SLATT_1
Motif
Other DBs
NCBI-ProteinID:
AQW86561
LinkDB
All DBs
Position
complement(1340311..1342449)
Genome browser
AA seq
712 aa
AA seq
DB search
MLNTVKKDELLECLVIFTKLHNNPYSADALTIGLPVEDGEEVELFSLSGSKSLFSRAAMR
AGFASTLVKKQLEDISPLVLPCILMLRGKRACILQSISSDKTTANIIVPDIANGVSTIEL
EKLKNEYLGYAYYLKKEFSPDESSSSHLLENTKEHWFWGTLKKSKKIYFDVIIATFIINL
FVLASPLFTMNVYDRVVPNNAVETLWVLAIGVLVVYLIDFFLKFIRSYFLEIAGKKSDII
MSSILFERVMDLKLTNRPKSVGSFASNLKEFDVIRNFFSSASLAAIVDLPFSIIFLLTIY
FIGSYLVFAPIVTMFIILIYTFSIKNPLQNAIKSTFEASAAKNGILIESLNGLETIKTLG
ASGHVQWNWEEATGEISSRSIKSKMITTSITTITAFLVHLNTIAIVVMGVYMIKDTNLTM
GGLIATVILSGRAIAPMGQVAALVANFEQTKTAYKGIDNIMNMPVERPEGKKFVRRNSFQ
GKIEFKNVSFAYPETVKGSLDRVNFTIQVGEKVAIIGRNGSGKTTIQKLMLGLYAPTDGS
VLIDGIDINQIDPADLRRNIAYVPQDVLLFKGTVRENIVQKAPYADDMQIIRAAKISGVD
EYVNMHPLGFDMPVLERGDGISGGQRQSIALARAFLLDSPIILLDEPTNSLDSTVENKLK
QNLKINLANKTMVLVTHRMSLLDLVDRIIVLDNGKVLLDGNRDEILKKLSGK
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
atgttaaatacagtaaaaaaagatgaattattagaatgtcttgtcatttttacaaagctt
cataacaatccttatagtgcagatgccctaaccataggtcttcctgttgaagatggagaa
gaggttgagctgttttcattaagtggttcaaaatcacttttttcaagagctgctatgagg
gcagggtttgcttctactcttgtaaaaaaacaacttgaagacatatcccctcttgtttta
ccttgtatattaatgctaagaggtaaaagagcttgcatacttcagagtataagctcggat
aaaactacagcaaatattatagttccagacatagcaaatggtgttagcactatagaatta
gaaaaattaaagaatgaataccttggctatgcttattatctaaaaaaagaattttctcca
gatgagtctagttcttcacatttgcttgaaaatactaaagagcattggttttggggaaca
cttaaaaaatcaaaaaaaatatattttgatgttattatagctacttttattataaattta
tttgttcttgctagtcctctttttacaatgaatgtttatgatagggttgttcctaataat
gctgttgaaacattatgggttttagctattggtgttttagttgtgtatttgatagatttt
ttcttaaaatttataaggtcttattttcttgaaattgctggtaaaaaaagcgatattatt
atgagctctattctttttgaaagagttatggatttaaaattaacaaatagaccaaaatca
gtaggttcttttgctagtaatcttaaagagtttgatgttataagaaatttcttttcttcg
gcatctttggctgctattgttgatttgccattttctataatatttttgcttactatttat
tttataggtagctatttggtttttgcgcctattgtaactatgtttattatacttatatac
acattttcaattaaaaatcctttgcaaaatgcaataaaaagcacatttgaggcgtctgct
gcaaaaaatggtatattaatagaaagtctaaatggacttgaaacgataaaaacacttggt
gcaagtggccatgttcagtggaattgggaagaggctactggtgaaatatctagcagaagc
ataaaatcaaagatgataacaacatctataactacaataactgctttcttggtacatctt
aacacaattgcgatcgttgttatgggtgtttatatgattaaagatactaatcttactatg
ggtggtttgatagcaactgttattctttctggacgtgctattgctccaatggggcaagta
gctgcgcttgtggctaattttgaacaaacaaaaacagcatataaaggtatagataatatc
atgaatatgccagttgaaagaccagaaggtaaaaaatttgttagaagaaattcattccag
ggcaagatcgagtttaaaaatgttagctttgcatatcctgaaacagtaaaaggttctttg
gatagggttaattttacaatacaagttggagaaaaagttgccataattggaagaaatggc
tctggaaaaacaactatacaaaagcttatgcttggcttatatgcaccgacagatggttct
gtgcttatagatggaatcgatataaatcaaatcgatccagctgacttaagaagaaatata
gcatatgttccacaagatgttttgttatttaaaggaacggttagggaaaatatagttcaa
aaagcaccttatgctgatgatatgcaaattattagagctgcaaaaataagtggcgttgat
gaatatgttaacatgcatcctttgggttttgatatgccagttcttgagcgtggagatggt
ataagtggaggccaaagacaaagtatagcgctagcaagagcatttttgcttgatagtcct
ataattttgctcgatgagcctacaaattccttagatagcaccgttgaaaacaaactaaaa
caaaatttaaaaataaacttagcaaataaaacgatggttttagttactcacagaatgtct
ttacttgatttggtagatagaattatagttcttgataatggcaaagtattacttgatggt
aatagagatgagattttaaaaaaattaagcgggaaataa
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