Campylobacter pinnipediorum: CPIN18020_1516
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Entry
CPIN18020_1516 CDS
T05033
Symbol
recJ
Name
(GenBank) single-stranded DNA-specific exonuclease
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
cpin
Campylobacter pinnipediorum
Pathway
cpin03410
Base excision repair
cpin03430
Mismatch repair
cpin03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cpin00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CPIN18020_1516 (recJ)
03430 Mismatch repair
CPIN18020_1516 (recJ)
03440 Homologous recombination
CPIN18020_1516 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cpin03400
]
CPIN18020_1516 (recJ)
DNA repair and recombination proteins [BR:
cpin03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
CPIN18020_1516 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
CPIN18020_1516 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
CPIN18020_1516 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
DHH
DHHA1
OSK
Motif
Other DBs
NCBI-ProteinID:
AQW86698
LinkDB
All DBs
Position
1509745..1511316
Genome browser
AA seq
523 aa
AA seq
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MLNKDDIRNLLELRFSKDIHKKLSEIPKPCDLKDTFKGAERIKQAIQNNENIVIVGDYDV
DGVISCVIMADFFDDLKVKNYKVRIPNRFKDGYGLNPAIIDEFKNADLIITVDNGISANE
AANMCKKLGIDLIITDHHMPLPVLPDAYAIINPKQEDCCFPNIEICGAQVAWYLIGALKE
VFGIKYDMGKFLDLLSIAIIADMMELRDMNRILVKLGIEKLNKSRRVAFCAIRDFYGKDR
FECDDISFLIAPLINSAGRMDDAINSFNFLRTKNINDAYKYLDVIVEFNNSRKEEERILF
EDSKKCVNENEHIIVTWGENWHEGVIGIVASRLAKHFKKPAIVFSVDKDKAKGSARSIGK
IDILSLIAEHEELLMSFGGHKGAAGLVCDPINLDKFKESINNSCFLMDLHKFSTNDEFLG
EISPKEIDYSLLEILEYFEPYGQKNPRPIFKIQNVTVKNDKLIGKEQNHLKLILQKGEKT
LEALFFNFTRHVRTGEKIDIVFSVSKNSFRGLITPQLLIKEII
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atgctaaataaagatgatataaggaatttacttgagctaagatttagtaaagacattcat
aaaaagctctccgaaattcctaagccctgcgacttaaaagacacatttaagggcgcagag
cgaataaaacaagccatacaaaacaacgaaaacatagttattgtcggagactatgatgtt
gatggtgttatatcttgtgtgataatggctgatttttttgatgatttaaaagttaaaaat
tataaagttagaatcccaaatagatttaaagatggctatggactaaatccagctataata
gatgagtttaaaaatgctgatttaatcataaccgtagataatggaataagcgccaatgaa
gccgctaatatgtgcaaaaaattaggcatagatcttataataacagatcatcatatgccg
ctacccgtattgccagatgcctatgcgataataaacccaaaacaagaagattgttgtttt
ccaaatattgaaatttgtggagcacaagtagcttggtatctaatcggtgctttaaaagag
gtatttggtataaaatacgacatgggtaagtttttagacctgctatctatagccatcata
gctgatatgatggaacttcgcgacatgaatagaatacttgtaaaattaggcatagaaaaa
ttaaacaaatcaagaagagttgcattttgtgccattagggatttttacgggaaagataga
tttgaatgcgatgatataagctttttaatagcgcctttgatcaactcagccggaagaatg
gatgatgcgataaattcatttaattttttacgaacaaaaaatattaatgatgcatacaaa
tatcttgatgtgatagttgagtttaataactcaagaaaagaggaagaaagaatactcttt
gaagattctaaaaaatgcgtaaatgaaaatgaacacattatcgttacttggggtgaaaat
tggcatgagggagttatcggaatagtagctagtcgtcttgctaaacattttaaaaaacca
gcaatagtatttagtgtagataaagacaaagcaaaaggaagtgcgagaagcataggaaag
atagatattttatctttgatagctgaacacgaagagcttttaatgagctttggtggacac
aaaggagcggctggacttgtatgcgatcctataaatttagataaatttaaagagtctata
aacaacagttgctttttaatggacttgcataaatttagcacaaatgatgagtttttagga
gaaattagccctaaagagatagattattctttgcttgaaattttagaatactttgagcct
tacggacaaaaaaaccctcgccctatatttaaaattcaaaacgtaactgtaaaaaacgat
aaactaataggaaaagaacaaaaccacctaaagctcattttgcaaaagggcgaaaaaacg
cttgaagcattgttttttaattttacaagacacgtaagaactggagaaaagatagatata
gttttttctgtatcaaaaaattctttcagaggacttatcacacctcaacttctaataaaa
gagataatttga
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