Chryseobacterium piperi: CJF12_01575
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Entry
CJF12_01575 CDS
T05071
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
cpip
Chryseobacterium piperi
Pathway
cpip03420
Nucleotide excision repair
cpip03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cpip00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CJF12_01575
03430 Mismatch repair
CJF12_01575
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cpip03400
]
CJF12_01575
Enzymes [BR:
cpip01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CJF12_01575
DNA repair and recombination proteins [BR:
cpip03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CJF12_01575
MMR (mismatch excision repair)
Other MMR factors
CJF12_01575
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
Viral_helicase1
ResIII
AAA_30
DEAD
AAA_11
UvrD_C_2
Motif
Other DBs
NCBI-ProteinID:
ASW73103
UniProt:
A0A086B4H0
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All DBs
Position
347926..349818
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AA seq
630 aa
AA seq
DB search
MNEMTAIEQIIENIDNKKSFVLEAGAGSGKTYTLIQTLNYLLENKGEDLKYNHQKIVCIT
YTNVAKNEVIERLENHPLVIVSTIHEFLWDCIKSYEKQLKIELCKLNEIRYQIDIDLGID
ESRYIPNLVDRLDRIDSVSYNDTAFRDFEKGQLHHDDVIILSKMMFFAYPLLTNILSQKF
PYLLIDEYQDTAKETINALVDSLLENNKDKIILGFYGDSHQKIYNNGVGDLANYTHPDSH
KLYLVKKEENYRSSIAVVNLLNKFRTNIEQKAQTDVEGSAKFIYCEYRPIKTRINRNNRE
VDDESRSAYNAEIDLQKKENFDKVVNLLVTRENWIFDKLDNKKNDKILVLVNSAVAKRND
FSNLYRIYSRRYIRSVGDELNKRRNALIQYFVGYTDKKISQERETGIEHLVKFWEECNYN
EVLRFLKRYSSLFVDGYLEHKHKKIITDILDELIVIRKTKSVKEVMEFVESRKLIRRSDA
VKKFIEQVGLDFDKLEEGSEKSRFVNNKILYDSLLGLSYKEIINFFEFTQNHTVFSTKHG
TKGEEYRNVLTVIDDKEWVNEAEGYNFEGFFDNTDVNEERKLRTRNLFYVECSRAKENLI
VLALSPMGESALNNIEKWFGKNNVIKLDNF
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atgaatgagatgacagcaatagagcaaattatagagaatattgataataaaaaaagtttt
gtattagaagctggcgctggttcaggaaaaacttatactctaattcaaactctgaactat
ttacttgaaaataaaggtgaagatttaaaatataatcatcaaaaaatagtttgtataacc
tacactaatgttgcaaaaaatgaggttattgaacgtttagagaatcatcctttagtaata
gtttcaactattcatgaatttttgtgggattgtataaaatcatatgaaaagcagttgaaa
attgaattatgtaagttaaatgagattaggtatcaaatagatatagatttaggtatagat
gaatcacggtatatccccaatttagtagataggttagatagaattgattcagtttcttat
aatgatacagcatttagggattttgaaaaagggcaactccatcatgatgatgttattatt
ttatcaaaaatgatgttttttgcttatccactactcactaatattttatcacaaaaattt
ccttatttactaattgatgaatatcaggatacagcaaaagaaacgattaacgcattagta
gattcattgctcgaaaataataaagataaaattattttaggcttctatggggattctcat
caaaagatttacaataatggtgttggtgatttagctaattatactcatcctgattctcac
aagctatatttggttaagaaggaggagaattatcgttcttctatagcagtggtaaatcta
ttaaataaattcagaaccaatatagaacaaaaggctcaaaccgatgttgaaggaagtgca
aaatttatttattgcgaatataggccaattaaaaccagaattaatagaaataatagggaa
gtagatgatgaaagtcgatccgcctacaatgcagagattgatttacaaaaaaaagaaaat
tttgataaagttgtgaatttattagtaactagagaaaattggatttttgataaattagat
aataaaaaaaatgacaaaatactagtattagtcaatagtgctgttgctaaacgaaatgat
ttctctaatttatacagaatttatagtagaagatatattagaagtgttggggatgaatta
aataaaaggagaaatgccttaattcaatatttcgtcggttatactgataaaaaaatatct
caggaaagagaaactggaattgaacatttggtgaagttttgggaggagtgtaattataat
gaagtgttgcgctttcttaaaagatatagctctttatttgttgatgggtatttagaacat
aaacataagaaaatcataactgatattttagatgagttaatagtaattagaaaaactaaa
tctgtaaaagaagttatggaatttgttgaaagtagaaaattgataagaagatctgacgct
gttaaaaaatttatcgaacaagtcgggcttgattttgataagttagaagaagggtcagag
aagagtaggtttgtaaataacaaaattttatatgattcattgttaggcctatcttataag
gaaataatcaacttttttgaatttacacaaaatcatactgttttttctacaaaacatgga
acaaaaggggaagagtatagaaatgtattgacagttattgatgataaagaatgggtaaat
gaagctgaaggatataattttgaaggttttttcgataatactgatgttaatgaagaaaga
aagttgagaactagaaatcttttttatgttgaatgttctagagcaaaagaaaatttaatt
gttttagcactttctcccatgggagaatcagcattaaataatattgaaaaatggtttggt
aaaaataatgttatcaaactagataatttttga
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