Chryseobacterium piperi: CJF12_02430
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Entry
CJF12_02430 CDS
T05071
Name
(GenBank) RNA-binding transcriptional accessory protein
KO
K06959
protein Tex
Organism
cpip
Chryseobacterium piperi
Brite
KEGG Orthology (KO) [BR:
cpip00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99973 Transcription
CJF12_02430
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tex_YqgF
Tex_central_region
HHH_3
Tex_N
HHH_9
S1
HHH_7
YqgF
T2SSK
HHH
HHH_5
HHH_6
HHH_2
ATP-synt_ab_C
Spt6_S1
S1_RRP5
HTH_11
Motif
Other DBs
NCBI-ProteinID:
ASW73259
UniProt:
A0A086BLM2
LinkDB
All DBs
Position
complement(546476..548599)
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AA seq
707 aa
AA seq
DB search
MTTVEFIQKQLNISEKSINNTLQLLSEDCTIPFISRYRKDFTGNLDEIQIEQIAKISKQF
DEIVKRKETILKSIEEQNALTPELKHRIEESFDLQELEDLYLPFKKRKKTKADAAKEKGL
EPLAKIIMSQKSNDLSFLASKYVNDQVSSEDEALQGARDIMAEWINENMYVRKNLRRLFQ
RKAVISSKVVKAKKEEEGAQKYSQYFEWDESLNRTPSHRLLAMLRAEAEGFVKVSVDIDK
GEAVEFIENAVIKSNNDSSEQIALAIKDSYKRLLEPAISNETLQEAKEKADKKAIEIFSE
NLSQLLLAPPLGEKRILAIDPGYKSGCKIVCLDEKGDLLHNETIYPHAPQNETGMAMKKI
RSMVNAYNIEAISIGNGTASRETEFFIKKIAFDKPLQVFVVSEAGASVYSASKIAREEFP
SYDVTVRGAVSIGRRLADPLAELVKIDAKSIGVGQYQHDVDQTQLKNELDSTVMKCVNSV
GINLNTASKSLLSYVSGIGEKMAENIVNYRAENGAFEDRKQLKKVPRLGEKAFQQAAAFI
RITNGKNSLDNSAVHPEAYGIVEKMAKDLGIKSNELIANKEKIALIQPEKYITDEIGILG
IRDILKELEKPGLDPRKAAKVFEFDPKVKSVKDLRVGMILPGIVNNITAFGCFVDLGIKE
SGLVHISQLKDGFVSDVNEVVKLHQHVQVKVTEVDEVRKRIQLSMIL
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
atgacgaccgtagaatttatacagaagcagctcaatatttctgaaaagagcatcaataat
acccttcaattattatctgaagattgtaccattccttttatatcccgctatcggaaagat
ttcaccggaaacctggacgaaatacaaatcgagcagattgccaaaatcagtaagcagttt
gatgaaatagtaaaaagaaaggaaactattctaaaatcaattgaagaacaaaatgcttta
acacctgagctaaagcataggatcgaagaaagtttcgatctgcaggagcttgaagattta
tatttaccctttaaaaagcgtaaaaagaccaaggcagatgctgcaaaagaaaaaggattg
gaaccactggcaaaaatcattatgagtcagaaaagcaatgacctatcctttcttgcttca
aaatatgtaaatgatcaggtttcttctgaagacgaagcgcttcagggtgcccgggatatt
atggccgaatggattaatgaaaatatgtatgtccgtaaaaaccttcgtcgactatttcag
cgtaaggctgtcatttcttctaaagttgtaaaagccaaaaaagaggaagaaggagctcaa
aagtactcccagtattttgaatgggatgaaagtctcaacagaacaccttctcacaggctt
ttagccatgttaagagcagaagctgaaggttttgtaaaagttagcgtagatattgacaaa
ggagaagctgtagagtttatagaaaatgctgtaatcaaatccaataatgacagttctgag
caaatcgcgttagctataaaggatagttacaaaagattactggagcctgccatttctaac
gaaacattacaggaagctaaagaaaaagcagataaaaaggcaattgaaattttctctgaa
aatttaagccagctattactggctccgccattgggtgaaaaaagaattttagccatcgat
cccggatataaaagcggatgtaaaattgtatgcttagatgaaaaaggagatctgctccat
aacgaaaccatctaccctcatgctccgcaaaacgaaacaggaatggcgatgaaaaaaatc
cgttctatggttaatgcttacaatattgaagcaatttctatcggaaatggaacagcgagc
cgtgaaacggaattcttcatcaaaaaaattgcttttgacaagcctttacaggttttcgtg
gtttccgaagcaggtgcttccgtctattctgcaagcaaaattgcaagagaagaatttccg
agttatgatgtcacagttcgaggagctgtttccattggaagaagattagcagatccattg
gcagaattggttaaaattgacgctaaatctattggtgtcggacagtatcagcatgatgta
gaccagacccagctaaaaaatgaattggattcgaccgttatgaagtgtgtcaactcagta
ggaatcaatcttaatacagccagcaaatcactcctgagctatgtttcaggaattggtgag
aagatggcagaaaacattgttaattaccgtgctgaaaatggagcttttgaagaccgaaaa
caattgaaaaaagtacctagattaggtgaaaaagcttttcagcaggcagcagcatttata
agaattactaatggaaaaaattcattggacaattctgctgtacatccggaagcttacggc
attgtagagaaaatggcaaaagacttaggaattaaatccaatgagttaattgctaataaa
gaaaaaatcgctttaattcaacctgagaaatatataacagacgaaattggtattctgggg
atcagggatattttaaaggaacttgagaagccaggattggatcctagaaaagctgctaaa
gtttttgaatttgatcctaaagtaaaaagtgtaaaagatctgagagtaggtatgattctc
ccaggaattgtcaataatattacagcattcggatgtttcgttgatctcggaattaaggaa
agcggattagtacatatctcacagctaaaagatggctttgtctccgatgtaaatgaggtg
gtgaaattacatcagcatgttcaggtaaaagtgacagaagtggacgaggtaagaaaaaga
attcaacttagtatgatcttgtaa
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