Chryseobacterium piperi: CJF12_02715
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Entry
CJF12_02715 CDS
T05071
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
cpip
Chryseobacterium piperi
Pathway
cpip03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cpip00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CJF12_02715 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpip03019
]
CJF12_02715 (recQ)
03400 DNA repair and recombination proteins [BR:
cpip03400
]
CJF12_02715 (recQ)
Enzymes [BR:
cpip01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CJF12_02715 (recQ)
Messenger RNA biogenesis [BR:
cpip03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
CJF12_02715 (recQ)
DNA repair and recombination proteins [BR:
cpip03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
CJF12_02715 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
RecQ-1-like_HTH
Helicase_C
RQC
HRDC
RecQ_Zn_bind
ResIII
HTH_40
HHH
GARS_N
Motif
Other DBs
NCBI-ProteinID:
ASW73307
UniProt:
A0A086BLH1
LinkDB
All DBs
Position
607948..610152
Genome browser
AA seq
734 aa
AA seq
DB search
MSAKKATLSGELKKYFGFSTFKGQQEQIIENLLEGKDIFVLMPTGGGKSLCYQLPALISE
GTAIVVSPLIALMKNQVDAVNGLSSDDGIAHVLNSSLNKTQTKQVFDDIKSGKTKLLYVA
PESLIKEDYLDFFKEVKISFFAIDEAHCISEWGHDFRPEYRNLKTIIDKIADVPVIALTA
TATPKVQDDIQKTLGMTNALVFKESFNRANLYYEVRPKVNIDREVVRFINQNKGKSGIIY
CLSRRKVEELAQLLQVNGINALPYHAGLDQKVRVANQDKFLMEEADVIVATIAFGMGIDK
PDVRFVIHYDFPKSLESYYQETGRAGRDGGEGYCLAFYDPKDIEKLEKFLAQKPVSEREI
GLQLLNEVVGYAETSMSRRQYILYYFGETFDPVKGDGANMCDNASNPPKLKDATEDLKKV
LKLINETGEKFKSKDLISVIVGKESAVTKSYKLEQTSYFGFGKDEKDNYWKTILRQATVQ
NFLQKDIETYGVLKISEKGLKVLDGKLEHSFLIAEDREFDLTQTKAESDQVQMQAGGSLD
QNLFTQLKELRKKVAKKYGIPPYTVFMDPSLEDMTIQYPVTVEEITKIYGVGEGKAKKYG
KEFADFIKTYVEDNNIECTHDMILKQVANKSSHKVFIIQSTDKKIDLEDIARAKNLTMNE
LLKEMESIVYQGTKLNIDYYIEDNFDEDIVDGFMEFMNESESDSMKVLLDEFGDELSDEE
VRMLRIKFISDVAN
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcaaaaaaagccactttatcaggcgaattgaaaaaatatttcgggttttctact
tttaaaggacaacaagaacaaatcatagaaaacctgttagaaggaaaggatatatttgtt
ttgatgccgacaggaggaggtaagtcattatgttaccaacttccggcactcatttcagaa
gggacggcaatagtagtttctcccttaatagcactaatgaagaatcaggtggatgccgtg
aatggtctttcttctgatgacggaatagcacacgttttaaattcatcattaaataaaacg
cagaccaagcaggtcttcgatgacattaaaagcggcaaaacaaaattattgtatgttgct
ccggaatcattaatcaaagaagattatcttgatttctttaaagaagttaaaatttctttc
tttgcgattgatgaggctcactgtatttcagaatggggacatgacttcaggcctgagtac
agaaatttgaaaacgattattgataagattgcagatgttcctgtcattgcacttacggca
acagccaccccaaaagttcaggatgatatccaaaaaacattgggaatgactaatgcattg
gtatttaaagaaagctttaatagagctaatctatactatgaagttcgcccaaaagtcaat
attgatcgggaagtcgttcggtttattaatcagaataaaggtaaatcagggattatatat
tgtttaagccgtaggaaagtagaagaacttgcgcaattattgcaagtaaacgggattaat
gcacttccgtatcatgctggcttagatcaaaaagtaagagtagccaatcaggataagttt
ctcatggaagaagctgatgttattgtggcgactattgcatttggaatgggaatcgataaa
ccggatgttcgttttgtaattcattacgatttccctaagtctctggaaagttactatcag
gaaaccggaagagccggaagagatggtggagaaggatactgcctggcattctatgatcct
aaagacattgaaaaattagaaaaattcctggctcaaaaacccgtctctgaaagagaaatc
ggattgcagcttttaaatgaggtagtaggatatgctgagacctctatgagcagaagacag
tatattctttattactttggagaaacttttgatcctgtaaaaggagatggggcgaatatg
tgtgataatgcttcgaacccgcctaaattaaaagatgcgacagaggatcttaaaaaggtt
cttaagctgatcaatgaaaccggagagaaatttaaatcaaaagatttgatctctgttatt
gtaggaaaagaaagtgctgtgaccaaatcttataaactggaacaaacctcttatttcggt
tttggaaaagatgaaaaagacaattattggaaaacaatcttaagacaggcaacggttcag
aactttttacaaaaggatattgaaacctatggtgttttaaagatttcagaaaaaggtctg
aaggtattggatggaaaattagagcactctttcttaattgctgaagacagggaatttgac
ttaacacagactaaggcagaaagtgatcaggttcaaatgcaggctggaggaagtcttgat
cagaacttattcacacagctgaaagaattaagaaaaaaagtggcgaagaaatacggaatt
cctccgtatacggtcttcatggatcctagtttagaagatatgacgattcagtatccggta
accgtagaagaaataaccaaaatttatggggttggtgaaggaaaagccaagaaatatggt
aaagaatttgctgactttataaaaacttatgtagaagataataatatcgaatgtacccat
gatatgattttaaaacaagtggctaataaatccagccataaggtttttatcattcagagt
acggataaaaaaatagaccttgaagatattgcaagagcgaagaatttaacaatgaatgaa
ttgttgaaggaaatggaaagtattgtatatcaagggacaaaattgaacatcgattattat
attgaagataatttcgatgaagatattgtagatgggttcatggaattcatgaacgaatct
gaaagtgacagcatgaaagtattgctggatgaatttggagatgagctttcggacgaagag
gtacgaatgttaaggataaaattcattagtgacgtagctaattaa
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