KEGG   Chryseobacterium piperi: CJF12_04435
Entry
CJF12_04435       CDS       T05071                                 
Name
(GenBank) DNA ligase-associated DEXH box helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
cpip  Chryseobacterium piperi
Brite
KEGG Orthology (KO) [BR:cpip00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cpip03400]
    CJF12_04435
Enzymes [BR:cpip01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     CJF12_04435
    5.6.2.6  RNA 3'-5' helicase
     CJF12_04435
DNA repair and recombination proteins [BR:cpip03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    CJF12_04435
SSDB
Motif
Pfam: WH_Lhr DEAD_assoc DEAD Helicase_C ResIII DUF7516
Other DBs
NCBI-ProteinID: ASW73610
UniProt: A0A086B9M5
LinkDB
Position
1008990..1011449
AA seq 819 aa
MTAFENTNGFKVIQQWMAEKGNSPFKFQTDTWWKFGNGYSGMVIAPTGFGKTFSVFLALI
TDFLNHPEKYKKGLKLIWITPLRSLSKDIAKAMDEAINEIGLDWTVGVRNGDTDPKIRQQ
QVKSMPDILVVTPESLHLLLAQKNHIRFFQNLQCIAVDECHELLGSKRGVMVELGISQVR
KYVPGLKIWGITATIGNLDEAMEVLIPYDVKKVKITAKQHKKIDIIPVFPDEVEILPWAG
HLGAKLADKIVPIILESKSTIVFTNTRSQSEMWYQLLLNAYPDFAGQIAIHHSSIDAHLR
IWIEENLSNGKLKAVVSTSSLDLGIDFKPVDTVIQIGSAKGVARFLQRAGRSGHSPFETS
KIYCVPTHSLELIEVAALKEAVKQKVVEPREPQVLCFDVLVQFLMTLAVGDGFYPNETYE
RIKQVYTFQEITDEEWKGIIDFLTIGGSALKSYEEFHKVVVMDDGLFKVTSRKIAMLHRM
NMGAIVSDAMLKVKFISGGYIGMVEEYFISKLKKEEKFILAGRVLEVAMVKDMTVYVRLA
KGKALAPSYLGGRLPLSSNLGQFLREKLSGALNPSASEKELKFLHPLLVSQEKRSHIPKD
DEFLVELIKNREGYHLFMYPFEGRLVHEVMAALIAFRISKLAPISFSMAMNDYGFELFSD
KEIPLSDEILKKILTRDNLMVDVISSINSAEMARRKFRDIAVISGMVIQNFPGQQRSNKA
LQSSAGLIFKVLEDYDPNHFLVRQAYTEVFNMQLQEQRLVEAFKRIEKSKIILKYANTFT
PLSFPIKVDSLRQTLSSEGLDMRIQKLIQQASKGRKINE
NT seq 2460 nt   +upstreamnt  +downstreamnt
ttgactgcttttgaaaataccaacggatttaaggtcattcagcaatggatggctgaaaaa
gggaattccccatttaagtttcagaccgatacctggtggaagtttggtaatggatacagt
ggaatggtcattgctcctacaggattcggaaaaacgttttccgtttttctggcattgatc
accgattttcttaaccatcctgaaaagtataaaaaaggacttaaattgatctggatcacg
cccctccgatccctttccaaagatattgccaaagcaatggatgaagccatcaatgaaatt
ggattagactggaccgttggcgttcgaaatggtgacacagatcccaaaataagacaacag
caggttaaaagtatgcctgatatattggtcgtaactcctgaaagcttacacttacttctt
gcccagaaaaaccacatcagatttttccagaatcttcagtgtattgcggtagatgaatgt
catgaattattgggttctaaacgaggagtaatggtagaactcggtatttcacaggttcga
aaatatgttcctgggttaaaaatatggggaattacagcgactataggcaatctggacgaa
gccatggaggtattgattccctacgatgttaaaaaagtaaagatcacagcaaaacagcat
aaaaagattgatattattcccgtctttccggatgaagtcgagattttaccatgggcgggg
catttaggagctaagcttgccgataaaattgttcccattatcctggaatctaaatctacg
atcgtctttaccaatacccggagccagagtgaaatgtggtatcagttgctgttgaatgct
tatcctgattttgcgggacaaattgccattcatcacagttccatagatgctcatttacgg
atctggattgaagaaaatttaagtaatggtaaattaaaagctgtcgtttctacttcatct
ttagatttaggtatcgactttaaaccggttgatactgtgattcaaataggatcagcaaaa
ggtgttgccagattcctgcaacgggcgggaagaagcgggcactccccttttgaaacttct
aaaatttactgtgttcctacccactctttggagctgattgaagtcgcagctttaaaagaa
gcggtcaaacaaaaagtggttgagcccagagaaccacaggtattgtgttttgatgttctg
gttcagtttctgatgacattggcggtcggtgacgggttctatccaaacgaaacctacgaa
agaataaagcaagtgtatactttccaggaaattacggatgaagaatggaaaggtattata
gatttcctgaccattggcggcagtgctttaaagagctatgaagaatttcataaagtagtt
gtaatggacgacggattgtttaaagtcacttcccgaaaaatagcaatgctgcaccggatg
aatatgggagctatcgtaagtgatgccatgctgaaggttaaatttatttccggaggctat
atcggaatggttgaagaatactttatttcaaagcttaaaaaagaagaaaaatttattttg
gcaggaagagtccttgaagttgcaatggttaaagatatgactgtttatgtacgtctggcg
aaaggaaaagcacttgctcccagttatctgggcggaagattaccattaagctctaatctc
gggcagtttttaagggaaaaactatccggagcactcaatccctctgcttccgaaaaagaa
ttgaaattcctgcacccgttattggtcagccaggaaaagcggtctcatattcctaaagat
gatgaatttctggtggaactgatcaaaaacagagaaggatatcatttatttatgtatccg
tttgaaggacgtttggtacatgaagtaatggctgcattaattgctttcaggatttctaag
cttgcccctatttctttttccatggcgatgaacgattatggatttgagcttttcagtgat
aaggaaatacctttgagcgacgagattttaaaaaaaatattgactcgggataatctgatg
gtcgacgtgatttcaagcattaattctgcagaaatggcccgacgtaaattccgggatatt
gctgtaatttcaggaatggtaatacagaattttccgggtcagcaacgatccaataaagca
ctacaaagttcggcaggattgatttttaaagtgctggaagattatgatcccaatcatttt
ctcgtaagacaggcctatacggaagtctttaatatgcagctgcaggaacaaagattggtg
gaagcttttaaaagaatcgaaaagtctaagattattttaaaatatgccaatacttttacg
ccattaagcttcccgattaaagtagacagccttcgtcaaaccctttcaagtgaaggttta
gatatgagaatacaaaagctgatacagcaggcaagtaagggaagaaagattaatgagtaa

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