Chryseobacterium piperi: CJF12_05950
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Entry
CJF12_05950 CDS
T05071
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
cpip
Chryseobacterium piperi
Pathway
cpip03030
DNA replication
cpip03430
Mismatch repair
cpip03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cpip00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CJF12_05950
03430 Mismatch repair
CJF12_05950
03440 Homologous recombination
CJF12_05950
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cpip03032
]
CJF12_05950
03400 DNA repair and recombination proteins [BR:
cpip03400
]
CJF12_05950
Enzymes [BR:
cpip01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CJF12_05950
DNA replication proteins [BR:
cpip03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CJF12_05950
DNA repair and recombination proteins [BR:
cpip03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CJF12_05950
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA
DNAX_ATPase_lid
DNA_pol3_gamma3
AAA_22
RuvB_N
AAA_30
AAA_14
RCF1-5-like_lid
Rad17
AAA_5
AAA_16
TIP49
nSTAND3
AAA_7
AAA_24
AAA_18
ABC_tran
AAA_19
RNA_helicase
AAA_assoc_2
DNA_pol3_delta_C
NTPase_1
AAA_2
SRP54
RsgA_GTPase
Sigma54_activ_2
NPHP3_N
AAA_33
AAA_11
TsaE
DUF815
DEXQc_Suv3
GNAT_acetyltr_2
AAA_28
Mg_chelatase
Motif
Other DBs
NCBI-ProteinID:
ATL75933
LinkDB
All DBs
Position
complement(1337338..1338426)
Genome browser
AA seq
362 aa
AA seq
DB search
MENFIVSARKYRPQEFDTVVGQSHITDTLEHAIEENQLAQALLFCGPRGVGKTTCARILA
RKINEKDGSVSEDGFAYNIYELDAASNNSVDDIRELIDQVRFAPQVGQYKVYIIDEVHML
SSAAFNAFLKTLEEPPAHAIFILATTEKHKIIPTILSRCQIYDFKRIVIEDIQGHLRNIA
QKENIQYEDDALYLIAQKADGALRDALSIFDRLSTFSQKNITLAKAAEVLNILDYDQYLN
ILDLAKENKIPEVLFAFNEIVKRGFDPHIFIAGLGNHCRDLMMAQNTSTIDLIEVGEKTK
IKFVEQSQKWSVQQLIDAIEICNHADINYKNSKNPRLTVEIALMQLASLTAQSADVTKKK
SL
NT seq
1089 nt
NT seq
+upstream
nt +downstream
nt
atggaaaatttcatcgtatctgcaagaaaatatcgcccacaagagtttgacactgttgtt
ggacaatcccatattacggatactttagaacatgcaattgaagagaatcagttagcacag
gctttactgttttgcggacctcgtggtgttggtaagactacatgtgccagaattctggcc
agaaaaatcaacgaaaaagatggttccgtttcagaagatggctttgcttataatatttat
gagcttgatgctgcctctaataactcagtggatgatatccgggaattgatcgatcaggtt
cgttttgcacctcaggtcggccagtataaggtatacattattgatgaggtgcatatgctg
tcttctgcagccttcaatgctttccttaagactcttgaagagccgcctgctcatgccatt
tttattctggcaacaacagaaaagcataaaatcattcctacgattttatcccgatgtcag
atttatgattttaaaagaatcgttattgaagacattcagggacatttaagaaatattgct
cagaaggagaatattcaatatgaagacgatgctttatatcttattgcccaaaaagcagat
ggtgccctgagagatgcactttctatttttgacaggctttctacattttctcagaagaat
attactctggcaaaagctgctgaagtacttaatattctggattatgatcaatatttgaat
attctggacctggctaaggagaataaaattcctgaagttctttttgcattcaatgaaatt
gtaaaaagaggttttgatccccatatttttattgccggattaggaaaccattgcagagat
ctgatgatggctcagaatacgtcaaccatagatttgattgaagttggtgaaaaaacgaaa
attaaatttgtagagcagagccagaagtggagtgtacagcaattaattgatgccattgaa
atttgtaatcatgcggatatcaattataaaaattcgaaaaatccaagacttaccgtagaa
attgctttaatgcaattagcttctttgacggctcaatcagcagacgttactaaaaaaaaa
agtttataa
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