Chryseobacterium piperi: CJF12_06630
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Entry
CJF12_06630 CDS
T05071
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
cpip
Chryseobacterium piperi
Pathway
cpip03030
DNA replication
cpip03430
Mismatch repair
cpip03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cpip00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CJF12_06630 (holA)
03430 Mismatch repair
CJF12_06630 (holA)
03440 Homologous recombination
CJF12_06630 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cpip03032
]
CJF12_06630 (holA)
03400 DNA repair and recombination proteins [BR:
cpip03400
]
CJF12_06630 (holA)
Enzymes [BR:
cpip01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CJF12_06630 (holA)
DNA replication proteins [BR:
cpip03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CJF12_06630 (holA)
DNA repair and recombination proteins [BR:
cpip03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CJF12_06630 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta
DNA_pol3_delta_C
DNA_pol3_delta2
DUF3201
Calici_coat
Motif
Other DBs
NCBI-ProteinID:
ASW73999
UniProt:
A0A086BJJ3
LinkDB
All DBs
Position
complement(1497513..1498550)
Genome browser
AA seq
345 aa
AA seq
DB search
MKELDLILKNIKNKEVLPIYFFHGDEPYFIDVAVKALEHEFLEEDEKAFNQTVTYGKDTS
YQEVLSLARQFPMMGDKQVIIVKEAQDLKLNEEENRILEAYVENPVPSTVLVFAHKHKKL
DSRKKVTKALDKAKALFLSESIRENNLPKWIADECSKLKIKTAPNISHLLAEYLGNDLSR
IANELGKLKIILKEGEVLDGTIIENHIGISKEYNVFELQKALGTKNANAAFKIAHFMGKN
PKNNPFVMMLASLYNYFSNIIIYQTMAGQPPQVIASQMGINPYFIKDYAESARLYPLKHA
TRVVSILREFDMKGKGLGAVNMSEGELIKELVYKIINVDKIKMKV
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaattagatttaatcctcaaaaatattaaaaataaagaagttttaccgatttat
tttttccacggagatgaaccctactttattgatgttgccgtaaaagctcttgaacatgag
tttttagaagaagatgaaaaggcttttaatcaaacggtgacttacggaaaagacacttct
taccaagaggttctttctttggcaagacagtttcctatgatgggagataagcaggtcatt
atcgtaaaagaggctcaggatctgaaacttaatgaggaagaaaacaggattcttgaagcc
tatgttgaaaatccggttccatcaacggtactggtttttgcacacaagcataaaaaactg
gacagcaggaagaaagtgacgaaagctttggataaagccaaagcgcttttcctcagtgaa
tcgatcagggaaaataatcttccgaaatggattgctgatgaatgtagcaagttgaagatt
aaaacagctccgaatatttctcaccttttagctgaatatcttggaaatgatctttcaaga
attgccaatgaactggggaagttaaaaattattcttaaagaaggtgaagtcctggacgga
accatcattgaaaaccatatcggaatcagtaaggaatataatgttttcgaattacagaag
gccttaggaacaaaaaatgctaacgcagcatttaaaatagctcattttatgggtaaaaat
cctaaaaataacccttttgttatgatgctggcaagcttatataactatttctccaacatt
attatttatcagaccatggctgggcagcctccgcaagttattgcttcacaaatgggaatc
aatccttattttattaaagattatgctgagagcgcaagactgtatcccttgaaacatgcc
acaagggtggtttctattttaagggaattcgatatgaaaggaaaaggtttgggagctgtt
aatatgagtgaaggtgaattgatcaaagaattggtgtataaaattatcaatgtggacaag
attaaaatgaaggtgtag
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