Chryseobacterium piperi: CJF12_07995
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Entry
CJF12_07995 CDS
T05071
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
cpip
Chryseobacterium piperi
Pathway
cpip03030
DNA replication
cpip03430
Mismatch repair
cpip03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cpip00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CJF12_07995
03430 Mismatch repair
CJF12_07995
03440 Homologous recombination
CJF12_07995
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cpip03032
]
CJF12_07995
03400 DNA repair and recombination proteins [BR:
cpip03400
]
CJF12_07995
Enzymes [BR:
cpip01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CJF12_07995
DNA replication proteins [BR:
cpip03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CJF12_07995
DNA repair and recombination proteins [BR:
cpip03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CJF12_07995
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
RNase_T
tRNA_anti-codon
DUF4447
Motif
Other DBs
NCBI-ProteinID:
ASW74239
UniProt:
A0A086B9I6
LinkDB
All DBs
Position
complement(1822554..1827218)
Genome browser
AA seq
1554 aa
AA seq
DB search
MYLVFDTETTGLPKNFNAPLSDSDNWPRMVQIAWQLHDDDGTLIENQDYIIKPEGYDIPF
NAARIHGITTKIANEEGRDLQEILEEFSKVLEKVRIVSGHNVEFDYNIVGAEFFRKNIKD
NLQEKPKADTMVLGTNYCQLGGGRGGRFKPPKLEELYEKLYGNKFDEAHNAAADVNATAQ
VFFEMMRIGIIPADVLKISEDQLAYFRSLYPDPIKPFGIVIRRQVADFHNKKKQQDFGSI
DEIDLGKYFNFDNHSVFSTLSATSSISDLIKKATDDNFPAVGMVDLGNMMGAFKFVSAVE
SANSDRSKQHKEYLSKKQEAEEKGEAFTEEEPVSEPLIPVVGCEFYISDRYEQKQFTKDD
PDRRTQVVLLAKDFNGYKNLAKLSSIGFLKGFYFGVPRISRELIAEYKEGLIALTSGILG
DIPDAVLNTGEQKGEELFKWWKDTFEDDFYVQIQNHNLPEEEHLNEVLLYFADKYDVKIL
AQNQTFYTNKDDSNIQDIVSCIKDGEKLSTPVGKGFGKRRGLATGEYYIKSGDEIKETFL
AYPDAFDAYEEFFAKFSPYTLKRDVLLPKFDIPQEFIHAEDDVDGGKRGEMAYLTHLTYE
GARRRYGEDGITESVKERLDFELDVIANTGYPGYFLIVQDFCNEARNMGVWVGPGRGSAA
GSAVAYCIGITNVDPIKYDLLFERFLNPERVSMPDIDIDFDDEGRDRIIKWVIDKYGQNQ
VAQIITYSVLGGKSAIKDAGRVLDLPIPDTNNIAKLIPSTPGMNIAKALAKYDKLKPEEQ
MLVDEMRFVLNTPGDSRHDVLASAKKMEGCIRNTGIHACGVIITPEDVSNLVPVTIAAKD
ADILVSQFDNSVAESAGLLKMDFLGLRTLTIIKDALKLVKERHNVDIDPDEIPLDDNKTY
QLFKEGRTVGIFQYESPGMQKYMRELKPTVFADLIAMNALYRPGPIKYIPNFINRKHGIE
EIVYDLPETEEYLKETYGITVYQEQVMLLSQKLANFTKGEADTLRKAMGKKQIDVLNKMY
PKFIEGGRKNNLDETRLEKIWNDWKAFAEYAFNKSHSTCYAFIAYQTAYLKANYPAEYMA
SVMSNNINNTEAITMFMEDCKSMGVDVLGPDVNESQYKFSVNEKGQVRFGLGAIKGIGEG
PSEGITRERQNGRFKNVYDFFERILPSQMNKRVAESLVVAGAFDELSSFHRGQYFDIDMA
GRTNLERLIRYGQSFQESKNEMENSLFADFAEEVQIEQPKLLPCPEWPNMHKLNKEKETI
GFYLSAHPLDEFKYQFQFIQGRLSKKSVLEKEDESKAVVEEVPILETDSQDEVVDLTEIV
SDEVLVGEEIIEEVTKKAEPKGNFLFLNLDEVDAYKEQAFANKQEELFEEKKKDWKTLQK
ERENGGAGKEYTVAGLITEYRVQDGFRSGEKVAFVTLEDYSGSYSFRLGDRDYMKLKEKL
EVQRFVIFKIKFAQVKDGRVFVNVNDVIELQEAFERFAKSISLVMDVMDFRPEDLEFFRN
VLDRNKGDQKFKFYIKDIEDDSQIEVQSMKHSVDLNGDLIKEIQLLNKYEFYLN
NT seq
4665 nt
NT seq
+upstream
nt +downstream
nt
atgtatttagtttttgacacagaaaccacaggtttaccgaaaaatttcaatgctccgctt
tcagactcagataactggccaagaatggtgcagattgcttggcagttgcatgatgatgac
ggaactttgatagaaaatcaggattatattattaagcctgaaggatatgatatccccttt
aacgctgccaggattcatgggatcactactaaaattgctaatgaagaaggacgggatctt
caggagatcctggaggaattttcaaaagttttagaaaaggtaagaattgtttcggggcat
aatgtggaattcgactacaatattgtaggtgctgaattcttcagaaaaaatataaaagac
aatcttcaggaaaagccaaaggctgatacaatggttttgggaaccaactattgtcagtta
ggtggaggaagaggaggaagatttaaacctccgaaattggaagagctttatgaaaagctt
tacgggaataaattcgatgaagcgcataatgcagctgccgatgtaaatgcaacggctcag
gtcttttttgaaatgatgaggattggaattattcctgctgatgtgcttaaaatctctgaa
gatcagcttgcttatttcagatctttataccctgatcctatcaagccttttggaattgtt
atcagaaggcaggttgctgattttcataataagaaaaaacagcaggatttcggaagtatt
gatgaaattgaccttggtaaatattttaattttgataaccacagtgttttctctacatta
tctgcgacttcaagtatttcggatttaattaaaaaggctactgatgataatttccctgcc
gttggaatggtggatttaggaaatatgatgggagcgtttaagtttgtgtctgctgtagaa
tctgcgaattcagacagatctaaacagcacaaggaatatctttctaaaaaacaggaagcg
gaagagaaaggagaggcttttacggaagaagagccggtttcagaacctttgattcctgta
gtaggatgtgaattttacatctcagacagatatgaacaaaagcagtttacaaaagatgat
ccggacaggagaacccaggttgtgctacttgccaaagattttaatggatataaaaatctg
gcgaaactttcaagtataggatttttaaagggattctattttggggttcccagaatcagc
cgcgaactgattgcggaatataaggaaggtttgattgctttgacctcgggtattttggga
gatatcccggatgctgttttaaatacgggtgagcagaaaggggaagagcttttcaaatgg
tggaaagatacttttgaagatgatttttatgttcagattcaaaatcataatcttcctgag
gaggaacacttaaatgaagtattgctgtattttgcagataaatatgatgtgaagatcctt
gctcagaatcagactttctatacgaataaagatgattctaatattcaggatattgttagc
tgtataaaggatggtgaaaagttgtccaccccagttggaaaaggatttggaaaaagaaga
ggactagcaaccggagaatattatattaaaagcggtgatgaaataaaagaaacattttta
gcgtatcctgatgcttttgatgcttatgaagaattttttgccaaattcagtccttatact
ttaaagcgggatgttcttcttccgaagttcgatattccgcaggagtttatacatgctgag
gatgatgtagatggtggaaagagaggggaaatggcttatttgactcatttgacctacgag
ggagccagaagaagatatggtgaggatggaattacagagagtgtaaaggaacgtttggac
tttgagctggatgtaattgccaataccggatatccgggatacttcctgattgtacaggat
ttttgtaacgaagcccgtaacatgggggtttgggtaggtccgggaaggggatctgcggca
ggatctgccgttgcttactgtatcggaattacgaatgtggaccctattaagtatgatctc
ctttttgagagattcctgaatccggaaagggtttccatgcccgatattgatattgacttt
gatgatgagggtcgggacaggattattaaatgggtaattgataaatacggtcagaaccag
gtagcgcagattattacctattctgttttgggggggaaatcagcgattaaagatgccgga
agggttttggatcttccgattcccgataccaataatattgcaaagctgattccttctaca
ccgggaatgaatattgccaaagctttggcaaaatatgataaattaaagccggaagaacaa
atgcttgttgatgaaatgaggtttgttctgaatactcccggagattcccgacatgatgtt
ttagcgagtgctaaaaaaatggaagggtgtatccggaatacaggaattcacgcgtgtggt
gtaattattacgcctgaagatgtgagtaatcttgttccggttacgattgcggcaaaagat
gcagatattttagtctctcaatttgataactcagtagcggaaagtgcagggcttcttaaa
atggatttcctgggacttagaacgctgaccattatcaaagatgcattgaagctggttaaa
gaacgacataatgttgatattgatccggatgaaattcctttggatgataataaaacctat
cagttatttaaagaagggagaacagttgggattttccaatatgaaagtcccgggatgcag
aagtacatgagggagcttaagccaacagtatttgccgaccttattgcaatgaacgcattg
tatcgtccggggccaattaaatatatccctaactttattaacaggaagcatggtatcgag
gaaattgtttatgatttacctgaaactgaagagtatctaaaggaaacatatggaattacc
gtttaccaggagcaggtaatgcttctgtctcagaaattggcaaatttcaccaagggtgaa
gctgatactctgagaaaagctatgggtaaaaaacagattgatgttcttaataaaatgtac
ccgaaatttattgaaggtggacgtaaaaacaatctggatgaaacgcggctagaaaaaata
tggaatgactggaaagcttttgccgagtatgctttcaataagtctcactctacctgctat
gcttttattgcctatcagactgcttatttaaaagctaattatccggctgaatatatggcg
agtgtaatgagtaataacattaacaatacagaggcaattactatgttcatggaggattgt
aaaagtatgggggttgacgttttgggacctgatgttaatgaatctcaatataaattctct
gtaaacgaaaagggacaggttcgttttggtttaggggcgattaaggggattggagaaggt
ccgagtgagggtattaccagagaaaggcagaatggaagatttaaaaatgtatatgatttc
tttgaaaggatccttccttctcaaatgaataaaagagtagcggaaagtttagtggttgct
ggtgctttcgatgaattgagctcttttcacaggggtcaatattttgatatagatatggct
ggaagaaccaatttggaaaggctgatccgttatgggcaaagttttcaggaaagtaaaaat
gaaatggaaaactctctgtttgcggattttgccgaagaggtacaaattgagcagcctaaa
ctattgccttgccctgaatggccaaatatgcataagcttaataaagaaaaagagactatt
ggcttctatctttctgcccacccgctggatgaatttaaatatcagtttcagtttatacaa
ggaaggctttctaaaaaatctgttttagaaaaagaagatgaaagtaaagcggttgtagaa
gaagttcctatccttgagacggattcccaggatgaggttgttgatttaacggaaattgtt
tctgatgaggttcttgtaggagaggagattattgaagaggtaactaaaaaagcagaacca
aaaggtaattttctattcttaaatcttgatgaggttgacgcttataaagaacaggctttt
gccaataagcaggaagaattgtttgaagaaaagaaaaaagactggaaaaccttacagaag
gaaagagagaatggtggcgcgggtaaagaatatacagttgcgggattgattacggaatac
agagttcaggatgggttcagaagtggtgaaaaagtggcatttgtcacattggaagattat
tccggatcttattcattcagactcggggatcgggattatatgaagttgaaagaaaagctt
gaggtgcaacgatttgttatatttaaaataaaatttgcgcaggttaaagatggtagggtt
tttgttaatgtgaatgatgtgattgagcttcaggaggcctttgaaagatttgcgaaaagt
atatctttggttatggatgttatggatttcagacctgaggatttagaatttttcagaaat
gtacttgatcgaaataagggggaccagaaatttaagttctacattaaagatattgaagat
gactcccagatagaggtgcagtcgatgaaacattctgtagacttgaatggtgatttgatt
aaagagattcaattactcaataaatatgagttttatctgaactaa
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