Chryseobacterium piperi: CJF12_09365
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Entry
CJF12_09365 CDS
T05071
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
cpip
Chryseobacterium piperi
Pathway
cpip03030
DNA replication
cpip03410
Base excision repair
cpip03420
Nucleotide excision repair
cpip03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cpip00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CJF12_09365
03410 Base excision repair
CJF12_09365
03420 Nucleotide excision repair
CJF12_09365
03440 Homologous recombination
CJF12_09365
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cpip03032
]
CJF12_09365
03400 DNA repair and recombination proteins [BR:
cpip03400
]
CJF12_09365
Enzymes [BR:
cpip01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CJF12_09365
DNA replication proteins [BR:
cpip03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
CJF12_09365
DNA repair and recombination proteins [BR:
cpip03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
CJF12_09365
NER (nucleotide excision repair)
GGR (global genome repair) factors
CJF12_09365
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH_5
RNase_H_2
DUF2202
ACS_CODH_B_C
HHH_2
Motif
Other DBs
NCBI-ProteinID:
ASW74468
UniProt:
A0A086B618
LinkDB
All DBs
Position
complement(2154664..2157489)
Genome browser
AA seq
941 aa
AA seq
DB search
MDATQDKRLFLIDAYAMIFRGYYALIRNPRLTSKGLDTSAIFGFTNSLIELIRRERPTHL
AVVFDVGQASVRTDDFADYKANRSETPEAIKVAIPYIHRILKAMHVPCLGVEGYEADDVI
GTIACKAEKEGYMTFMVTPDKDFAQLVTDKIKIYKPGLKGGDIEILGVDEVKAKYEIEDP
KQVIDFLAMMGDAVDNIPGLEGVGEKTAMKFLKEYGSIENLLANTHQLKGKLKEKVEASA
ERGILSKKLATIICDAPIEFHQEQYDLETPDFEKVKEVFDEIEFRRLYENLYRAFAPKET
IVVSEVEVTKTSKGTEVKGQVTQLDLFSTYEELDQATSTKSTIEHNEHLYQFVDNPKAQK
MLVNNLLKQRAVCFDTETTSLNELEAELVGMSFSYKKGLAYYVPLSEDQGEVLQTLEIFR
PFFEKEDLLKIAHNLKFDYKILKQYDITVKGAMFDTMIAHYLLNPDGRHGMDYLSEVYLN
YKPVSIETIIGKKGKNQGTFRDADLRTQTDYAAEDADVTFQLYELFAPQLKKEKLEDLFF
NIEMPLMVVLAKMELSGISLDEKWLAQESIDLENDLRQLESKIFELSGEEFNMNSPKQLG
EILFEKMQLDPKAKKTKTGQYATSEDVLQKLSSKHEIIKHILEYRTYQKLKSTYVDALPS
QIDKDERVHTNFSQTTAATGRLTSVNPNLQNIPIRTLRGQQIRGAFVSGEGKKIISADYS
QIELRLIAEISGEENMIKAFQNGEDIHASTAAKLFKIPLEEVSKTQRGQAKTVNFGIIYG
QGAFALAEQTGLSRTEAKQMIEAYFETYPKLKEYMAEQVSKARELGYVETILGRKRHLKD
INSNNFVVRGHAERNAVNAPVQGSAADVVKMAMIKIDQQLEEQNLQTKMLLQVHDELVFE
APIEEIEAASKLIKTEMESAIETQVPLLVEVGVGNNWLEAH
NT seq
2826 nt
NT seq
+upstream
nt +downstream
nt
atggacgcaactcaagataaaaggttatttctcatcgatgcttatgcgatgattttcaga
ggatattacgcattgatcagaaatccgaggcttaccagtaaaggattagacacttctgct
atttttggttttacaaactcattgatcgaattgatcaggagagaaagaccgacgcattta
gccgtagtttttgatgtggggcaagcaagtgtgagaacagatgattttgcagattataaa
gcgaacagaagcgaaacacccgaagcgattaaagtagcgattccatatattcacaggatt
ttaaaggcaatgcatgttccttgtttaggagtagaagggtacgaggcagatgatgtaatc
ggaacaattgcgtgtaaagctgaaaaagaaggctatatgacttttatggtgacccctgat
aaagattttgcccagctggttactgataaaattaaaatttataagccgggattgaaaggt
ggagatatagaaattctgggcgtggatgaagtaaaggcaaaatatgaaattgaagatcct
aagcaggtaattgatttcctggctatgatgggagacgctgtagataatatccccggactg
gaaggagttggagaaaaaacggccatgaaattccttaaagaatatggaagtattgaaaac
cttctggccaatacccatcagctaaaaggaaaactgaaagaaaaagtagaagcttcggca
gaaagaggtattttatctaaaaagctggcgactattatttgtgatgctcctatcgaattc
caccaggaacaatatgatctggaaactccggattttgaaaaagtaaaagaagtttttgac
gaaatagagttcagaagactatacgaaaatctgtatcgtgcctttgcacctaaagaaact
attgtcgtaagtgaagtggaggtaaccaagacttcaaaaggaacagaagtaaaaggacaa
gtaacccagttggatttattttcaacctatgaagagctggatcaagccacctctaccaaa
tctacgattgaacataatgaacatctgtaccaatttgtagataacccgaaggctcagaaa
atgctggttaataacttgctgaaacaaagggctgtatgctttgatacagagactacctct
ttgaatgagctggaagcagaattggtaggaatgagcttttcttataaaaaagggctggca
tattatgttcctttatccgaagatcagggtgaggtattgcagacccttgaaattttcaga
ccgttttttgaaaaagaagacctgttgaaaattgcccacaaccttaaattcgattataaa
attttaaagcaatatgacatcaccgtaaaaggagcgatgtttgataccatgattgcccac
tatcttctgaatcctgatggaagacatgggatggattatctttcagaagtttatctgaat
tataaaccggtttctattgaaactatcattggcaaaaaaggaaaaaatcagggaactttc
agggatgcggatctgagaacgcagacagactatgctgccgaagatgctgatgtaacgttt
cagttatatgagctgtttgctccacaactaaagaaagaaaaattagaagacctgttcttt
aacatagaaatgcctttgatggtcgttttagcaaaaatggaactgtcgggaatttctctg
gatgaaaaatggctggctcaggaaagcattgatctggaaaatgatttgagacaattagaa
tccaagatctttgaactttcaggagaggaattcaatatgaattctccgaaacagttggga
gaaatcctgttcgaaaaaatgcaacttgatcctaaggctaaaaagacaaaaacaggacaa
tatgcaacttcagaagacgtattgcagaaactgtcctcgaaacatgagattattaaacat
atccttgaatacagaacgtatcagaaattaaaatcaacctatgtagatgctttaccgtct
cagattgataaagatgaacgtgtgcataccaatttctctcagacaacggcagcaaccggt
cgtttaacaagtgtaaacccgaacttacagaatattccgatcagaacattgagagggcaa
cagattcgtggagcatttgtttcaggagaagggaagaagattatttctgccgattattca
cagattgaacttcgtttaattgcggaaatttcaggagaagaaaacatgatcaaggcattc
cagaacggagaagatattcacgcttctactgccgctaaactgtttaaaattcctttagag
gaagtttccaaaacccagagaggccaggctaagaccgttaattttggtatcatctatggg
cagggtgcttttgctttggcagagcaaaccggtttatcaagaacagaagctaaacaaatg
attgaagcttattttgagacttatccaaagttgaaagaatatatggcggaacaggtaagt
aaagcacgtgaattaggttatgtagaaacgattttggggagaaaacgtcatttaaaagat
atcaattccaataattttgttgtacggggacatgctgaaagaaatgcggtgaatgcaccg
gttcaagggagtgctgctgatgttgtgaaaatggctatgattaaaattgaccaacaatta
gaagagcaaaatcttcagactaaaatgttgctgcaagtacatgacgaattggtatttgaa
gctccgattgaagaaattgaagcggcttctaaattaattaaaaccgaaatggaaagtgcc
attgaaacacaggttcctttactggttgaggttggcgttggaaataattggctggaggcg
cattaa
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