Chryseobacterium piperi: CJF12_12040
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Entry
CJF12_12040 CDS
T05071
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
cpip
Chryseobacterium piperi
Pathway
cpip03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cpip00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CJF12_12040
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cpip03021
]
CJF12_12040
03400 DNA repair and recombination proteins [BR:
cpip03400
]
CJF12_12040
Enzymes [BR:
cpip01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CJF12_12040
Transcription machinery [BR:
cpip03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CJF12_12040
DNA repair and recombination proteins [BR:
cpip03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CJF12_12040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
Motif
Other DBs
NCBI-ProteinID:
ASW74939
UniProt:
A0A086BF39
LinkDB
All DBs
Position
complement(2740444..2741439)
Genome browser
AA seq
331 aa
AA seq
DB search
MAILQFIKPDKVILLNSDEFKGQFEFRPLEPGFGLTIGNALRRVLLSSLEGYAISSIKIE
GVEHEFSTIPGVIEDVTEIILNLKQVRLKATAENQSNEQVVAKVSGQTIITAGDLGKSIN
GFEILNPELIICNLNSDVTFEITFNVEKGRGYVPSEQNKSNNAPVGTIAIDSIFTPIKKV
QYSIENYRVEQKTDYEKLVLDIETDGSISPQNALTEASKILIYHFMLFSDERITLETEAV
KASIQYDEETLHTRQLLKSKLADMDLSVRALNCLKAAEVETLGELVSYSKSDLMKFRNFG
KKSLTELEELVHSKGLNFGFDVAKYKLDADK
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atggcaattttacaattcataaaacccgataaagtaattttacttaactctgatgaattt
aaaggtcaatttgaattcagacctttagaaccaggtttcgggcttacaatcggtaatgct
ttgagaagagtgttgctttcttctctggaaggatacgctatttcatctatcaaaatagaa
ggtgtagagcacgaattttcaactattccaggagtaatcgaagatgttaccgaaattatt
cttaaccttaagcaggtaagattaaaagctacggcagaaaaccagtctaatgagcaggtt
gttgccaaagtttcgggtcaaacgattattactgctggagatttaggtaaatcaatcaac
ggatttgaaattttaaatcctgagttgattatttgtaacctaaacagtgatgtaactttc
gaaattactttcaatgtagaaaagggtagagggtatgttccttctgaacaaaataagtca
aacaatgcacctgtaggtactattgctattgactctattttcacgccaattaagaaagta
caatacagcattgaaaattatcgtgtagagcaaaagacagactacgaaaaacttgtatta
gatatagaaactgatggttccatcagtcctcaaaatgctttaacagaagcttctaagata
ttaatttatcacttcatgttattctctgatgagagaatcacgcttgaaacagaagctgta
aaagcatctatccaatatgatgaagaaactcttcatacaagacaactccttaagtctaaa
ttagcagatatggatctttcagtgagagctctaaactgtttgaaggctgcagaagttgaa
acgttaggagaattagtttcttacagtaagtctgatttgatgaaattcagaaattttggt
aaaaaatctttgacagaactagaagaattagtgcattcaaaaggtcttaacttcggtttc
gacgttgcaaaatataagttagacgctgataaataa
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