Chryseobacterium piperi: CJF12_16020
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Entry
CJF12_16020 CDS
T05071
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
cpip
Chryseobacterium piperi
Brite
KEGG Orthology (KO) [BR:
cpip00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cpip03032
]
CJF12_16020
03400 DNA repair and recombination proteins [BR:
cpip03400
]
CJF12_16020
Enzymes [BR:
cpip01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
CJF12_16020
DNA replication proteins [BR:
cpip03032
]
Prokaryotic type
DNA Topoisomerases
CJF12_16020
DNA repair and recombination proteins [BR:
cpip03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
CJF12_16020
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Motif
Other DBs
NCBI-ProteinID:
ATL75995
UniProt:
A0A086B5N8
LinkDB
All DBs
Position
3627927..3630473
Genome browser
AA seq
848 aa
AA seq
DB search
MSKNLVIVESPAKAKTIQKYLGKDFDVKSSFGHIRDLPKKGMGIDLETFSPDYEVSADKK
KLVTELKSAVKKAEIVWLASDEDREGEAIAWHLADELKLKPENRKRIVFHEITKNAILKA
IENPRDIDQNLVNAQQARRVLDRIVGFEMSPVLWKKVKPGLSAGRVQSVAVRLIVEREKE
IRVFTPKASFKLEGIFLNKTEQEISAKLKKDFEKEEDAEKFLETAKTTEFKVLNVETKPG
TRSASAPFTTSTLQQEASSRLGYNVTNTMRLAQRLYEEGYITYMRTDSVNLSQEAIEGAK
KQIISEYGTEYSAPRKYTTKSASAQEAHEAIRPTDFGVKSIGDTQLNRLYQLIYRRTLAS
QMANAKIEKTVIEIGNPSLPQHFEAQGEVIIFDGFLKAYGIVKTEDEDDENNEKLLPKVS
IGEVLEYKSITATEKFTRPSARYTEAGLVKKLEELGIGRPSTYAPTIQTIQNREYVDKRE
IEPQTREVVKMSLVKDKIKKVVLDEKFGGDKNKFVPTDIGEVVNDFLIDHFKEILDYGFT
ARVEESFDEIANGDQKWKEMMTDFYSKFHPRIADVEENADRANGDRLLGVDPKTGKNVHA
RIGRFGAMIQIGETEDEEKPTFASLMVGQNIATISLEEALELFKLPFELNDYEGQAVSVG
VGRFGPYVKWGETYISIPKGEDPLSVDQKRAEEIIGEKKKADAPIATYKGEPVTKGTGRF
GPFIKYQSIFVNVPKKYNFDNLSQSDINELIDAKLEKEANRYIQQWEKEKISIENGRWGP
FVKFGKAMFKIPKKKDETKYDAEELKEVSLDEVKKWITAQDKNAFAEKKKPAAKKKAPAA
KKTTAKKK
NT seq
2547 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaaaatttagtaatcgtagagtccccggccaaagcaaaaactattcagaaatat
ttaggaaaggattttgatgtgaaatcgagtttcggtcatatccgggatttacccaaaaaa
ggaatgggaattgatcttgagacattcagtcctgattacgaagtttctgcagacaagaag
aaattagtaacggaattgaaatctgctgtaaaaaaagctgaaatagtttggttagcttcc
gatgaggatcgtgaaggagaggctattgcatggcatttggcagatgaattaaaattaaaa
ccggaaaacagaaaaagaattgttttccatgagattactaaaaatgccattctaaaagca
atcgaaaatcctagagatattgatcaaaatttggtgaatgctcaacaggcccgaagagtt
ttagaccgaattgtaggttttgaaatgtctccggttctttggaaaaaagtgaaaccagga
ttatctgcgggtagagttcagtctgtagctgtaaggttgattgttgaaagagaaaaggaa
attcgtgtattcaccccaaaagcaagttttaaattagaaggtattttcttaaataaaacg
gagcaggaaatttccgcaaaacttaaaaaggattttgaaaaagaagaagatgctgaaaag
ttcctagaaacggcaaaaactacagaatttaaagttctgaatgttgaaactaagccggga
acacgttctgcatccgcaccttttacaacttctacactacaacaggaagcatcttcaaga
ttaggctataacgttaccaatacgatgcgtcttgctcaaagattatatgaggaggggtat
attacttacatgagaacagactcagtaaatctttctcaggaggcaatagaaggagcaaaa
aaacaaattatttcagaatatggaacggaatattctgctccaaggaaatatactacaaag
tcagcttcggcacaggaagctcacgaggctattcgtcctactgattttggagtaaagagt
atcggtgatactcaattaaacagattatatcagctgatatacagaagaacactggcctct
cagatggctaatgctaaaatagagaaaacagtaattgaaattgggaaccctagcttgccg
cagcattttgaagcgcagggagaggtgatcatttttgatggtttcttaaaagcttatgga
attgtaaaaaccgaagatgaagatgatgagaataatgaaaagttattgccaaaggtaagt
ataggagaggttttagaatataaatcaatcacagcaactgaaaaatttaccagaccaagt
gcacgatatacggaagcaggattggtaaaaaaacttgaagaattaggaattggtcgtcca
tctacttatgcgccgacaattcagactattcaaaatcgtgagtatgttgataaacgtgag
attgaaccgcaaactcgggaagtagtaaaaatgtctttagtaaaagacaaaataaaaaaa
gtagttcttgacgaaaagttcggcggagataaaaataaatttgttcctacagatataggt
gaagttgttaatgacttccttatcgatcattttaaagagatcctggattacggattcaca
gcaagagtagaagaaagttttgatgaaattgccaatggtgatcaaaaatggaaggagatg
atgactgacttctattctaaatttcacccgagaattgctgatgttgaagaaaatgcagat
cgcgctaacggggaccggttattaggagttgatcctaaaacaggtaaaaatgtacatgca
agaattggtagatttggagcaatgatccagattggagaaactgaagatgaagaaaagcca
acttttgcatcattaatggttggtcagaatattgcaaccattagccttgaagaagctctg
gaattattcaaattacctttcgaacttaatgattacgaaggacaggctgtttccgtagga
gttggtagattcgggccttacgtaaaatggggtgaaacatatattagcattcctaaaggt
gaagaccctctttccgtagatcaaaaacgtgcggaagaaatcattggtgaaaagaaaaaa
gcagatgctccgattgcgacttataaaggagagcctgtaacaaaaggaaccggaagattt
ggaccatttatcaaataccagagcatttttgtgaatgttcctaaaaaatataactttgat
aatctttctcagagcgatatcaacgaattaattgatgcaaaattggagaaagaagccaat
aggtatatccagcaatgggaaaaggagaaaatttctattgaaaatggaagatggggccca
ttcgttaaatttggaaaggcgatgtttaagattccaaagaaaaaggatgaaaccaaatat
gatgctgaagaattaaaagaagtttctttggatgaggtgaaaaagtggattacagcccag
gataaaaatgcatttgcagagaagaaaaagcctgcggctaagaagaaggctcctgcagca
aaaaaaacaacagccaaaaagaagtaa
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