Chryseobacterium piperi: CJF12_16925
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Entry
CJF12_16925 CDS
T05071
Symbol
rnc
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
cpip
Chryseobacterium piperi
Brite
KEGG Orthology (KO) [BR:
cpip00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
CJF12_16925 (rnc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpip03019
]
CJF12_16925 (rnc)
03009 Ribosome biogenesis [BR:
cpip03009
]
CJF12_16925 (rnc)
03036 Chromosome and associated proteins [BR:
cpip03036
]
CJF12_16925 (rnc)
Enzymes [BR:
cpip01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
CJF12_16925 (rnc)
Messenger RNA biogenesis [BR:
cpip03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
CJF12_16925 (rnc)
Ribosome biogenesis [BR:
cpip03009
]
Eukaryotic type
90S particles
RNase
CJF12_16925 (rnc)
Prokaryotic type
rRNA processing factors
CJF12_16925 (rnc)
Chromosome and associated proteins [BR:
cpip03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
CJF12_16925 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonuclease_3
Ribonucleas_3_3
dsrm
RM44_endonuclase
DSRM_2
Motif
Other DBs
NCBI-ProteinID:
ATL75999
UniProt:
A0A086BLY6
LinkDB
All DBs
Position
complement(3844707..3845468)
Genome browser
AA seq
253 aa
AA seq
DB search
MELQKYFSKFLLKQRKRKLTERDYFLSTELNKILGTEVENVALYREAFSLKNSSKNQDSN
YERLEFLGDSVLGTIISCHLFQTYPRANEGYLTQMKSKIVNRKNLNKLGEDLKLTDLLIK
QNSVALGENISGNLFEALIGAVYLDFQYDTCKKIILERLLTPSEINKLENKIVSYKGLLL
EWSQKKKLHIKYETCEEVQANKAIVFRCHVWLGDEKIANATETSKKKAEEKAAQRAFYIL
NKKENILGNSKTL
NT seq
762 nt
NT seq
+upstream
nt +downstream
nt
atggagttacagaaatacttttctaaattccttctcaaacaaagaaaaagaaaattaacg
gagagagactattttctcagcactgaactcaataagatattaggtactgaggtagaaaat
gttgctctttaccgggaagctttttctttgaaaaattcttctaaaaatcaagacagtaat
tacgaaaggcttgaatttttgggagattctgttttgggtacaattatctcttgtcatttg
tttcagacttatcctcgggctaatgaaggatatttaacacaaatgaaatctaagattgtt
aataggaaaaatcttaataaattaggggaagatttaaagctgactgatcttttaatcaaa
caaaattctgtagctttaggcgaaaatatctccggaaacttatttgaggcattaatcggt
gctgtttatctggactttcaatatgatacttgtaaaaagatcattttggaacgactactg
acgccctctgagattaataaactcgaaaataaaattgtaagctacaaaggccttctgctt
gaatggagccagaagaaaaagctgcatataaagtatgaaacctgcgaagaggttcaggct
aataaagcgatcgtatttcgctgccatgtatggctgggagatgagaagattgccaacgct
actgaaacttcgaaaaagaaggcggaagaaaaagctgcacaacgggcattttatatttta
aacaaaaaagaaaatatacttggaaattcaaaaactttatga
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