Chryseobacterium piperi: CJF12_19115
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Entry
CJF12_19115 CDS
T05071
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
cpip
Chryseobacterium piperi
Brite
KEGG Orthology (KO) [BR:
cpip00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cpip03009
]
CJF12_19115 (rimO)
Enzymes [BR:
cpip01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
CJF12_19115 (rimO)
Ribosome biogenesis [BR:
cpip03009
]
Prokaryotic type
ribosomal protein modification factors
CJF12_19115 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
TRAM
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
ASW76171
UniProt:
A0A086BKD1
LinkDB
All DBs
Position
4328955..4330256
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AA seq
433 aa
AA seq
DB search
MRTKSVGKKKINIVTLGCSKNVYDSEVLMSQLKANGKEVVHEDRGDIVVINTCGFIDNAK
EESINTILDYVDAKNRGEVEKVFVTGCLSERYKPDLVREIPDVDQYFGTRDLPILLKHLG
ADYKHELVGERLTTTPKHYAYLKISEGCDRPCSFCAIPLMRGGHVSTPIEKLVSEAQKLA
KVGTKELILIAQDLTYYGLDIYKRRALGDLLKELVKVEGIEWIRLHYAFPSGFPEDVLDI
IREEPKVCNYIDIPLQHINSDLLKSMKRGTTHEKTDALLAKFREKVPDMAIRTTLIVGYP
GETEERFQELKDWVREQRFDRLGCFTYSHEENTTAHVLEDDIPQEVKEVRVEEIMELQSQ
ISWEKNQQRIGEVYKCVFDRKEGNYFIGRTEYDSPDVDNTVLVSADNTYISIGEFAMVKI
TSAEEFDLYGELI
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atgcgcacaaaatctgtaggtaaaaagaaaatcaatattgtaacgcttggctgttccaaa
aatgtttatgattctgaagtactaatgagtcagcttaaagcaaacggtaaagaagtggtt
catgaagacagaggagatattgttgtcatcaatacttgtggttttattgacaatgcaaaa
gaggaatctattaatactattcttgattatgtagatgctaagaatagaggggaggtagaa
aaagtttttgttacaggttgcttatctgaaagatacaagccagatttggttagagaaatt
ccggatgttgatcaatactttggaaccagagatctgcctatcctattaaaacatttaggt
gcggactataaacatgaattagtaggagagagactaacgacgactcctaaacattatgcc
tacctgaagatatctgaaggctgtgacagaccttgttctttttgtgcgatcccgttaatg
agaggaggacatgtttctacaccaatagaaaagttagttagcgaagcacaaaagctggca
aaagtaggaacgaaagagcttattttgatagcacaggatcttacttattatggtttggat
atttataaaaggagagcacttggtgacttattaaaagagttagtgaaagtagagggaatt
gaatggattcgtttacattatgcttttcctagtggatttccggaagatgttctggatatt
atccgtgaagaaccaaaggtttgtaactatatagatattcctcttcagcatatcaattca
gacttattaaaatcgatgaagagaggaacgactcatgaaaaaacagatgctcttttagca
aaattcagagaaaaagttcctgatatggctattagaacaactctaattgttggttatcct
ggagaaacggaagagagatttcaagagctgaaagactgggtaagagagcaacgttttgat
agacttggctgttttacttattcacatgaagaaaatacaactgctcacgttttggaagac
gacattcctcaagaagtaaaagaagtgagggtagaagaaatcatggagttgcaatctcag
atttcatgggagaaaaatcaacagagaattggtgaagtttataaatgtgttttcgaccga
aaagaaggaaattattttattggacgaactgaatatgattcaccggatgtagataatact
gttcttgtttctgcagacaatacttacatttcaataggtgaatttgctatggttaaaatt
acttcagctgaagaatttgacctgtatggtgaattaatttga
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