Chryseobacterium piperi: CJF12_19985
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Entry
CJF12_19985 CDS
T05071
Name
(GenBank) exonuclease SbcC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
cpip
Chryseobacterium piperi
Brite
KEGG Orthology (KO) [BR:
cpip00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cpip03400
]
CJF12_19985
DNA repair and recombination proteins [BR:
cpip03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CJF12_19985
Archaeal homologous recombinant proteins
CJF12_19985
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SMC_N
SbcC_Walker_B
AAA_29
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
ATL75967
UniProt:
A0A086ASW2
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All DBs
Position
2500254..2503292
Genome browser
AA seq
1012 aa
AA seq
DB search
MIPIKLTIEGLYSYQERQTIDFKNLTEAGLFGIFGSVGSGKSSILEAISFVLYGETERLN
MRDKRAYNMMNLKSNSSYIEFDFVSHENKLFRVARDFRRNSKKFDDVKPSSVTFYENINE
KWIPLDHSNAEQIIGLSYANFKRTIIIPQGQFKEFLELGAAERTHMMKEIFNLQRFDLQN
NVSALYARNRSELDQLQGELKGFEEINEEQLKSQKEKLKEEQQKFDEVKKEHLHISEKYQ
QLKNLKTDFENLQQKKENFLKVSSEKEKIDELEKKTNLYDTVYRVFHPLLLEKDKLSNEI
LSKRKDHESHTKSLHETEKVFNKIQEQLHLIQPKFEALNVTKIQESDLNLILQIMKFSKE
ISTLEERTKKGSEKVNEVKEKQQTIQKKVDTLSKELEALKPQKLDANLLLNVANWFVHKK
SLISQQQKQTQKLIVQKESIQKITDELKLLEVDTDTFREKFKIKSDALEANKKELSQKLD
HLKLQKELSRFASELHAGESCPLCGSLEHPNIIEFHDVNKEIQEIQEKTQSIEHEISKIQ
NQKTDIEKILDRRNIFEAQLQSEQSVLEILQNELKDHYQKFVWLDFNADNESEFEAKRQQ
SSVIEKQIEEINHQISQEREALEKERENLEKYNKALEEFKLEEAKKEEQINTNRSNLKNL
DWNEYKEKEYSEVEILYQQLAQSNIETEKNYLSLTQQEKETSPKLTEQQTIVTQLNNRIS
ELEREIASHNQILEKALSEKSFHSIADVQGILSQEISVQETRNQIQAFRIQFETLKNSIH
ELETKLKDFSFDQEQFDKIENQFKSVEINLQQTNDAVVKVISEIERLEKEFLKKESLLKE
LSELQKRSENLKVITNLFKASGFVQYVSSIYLRQLCDHANVRFHRMTRSQLSLQLNDNND
FEIIDYLNEGRSRSVKTLSGGQAFQVSLSLALALAESVQATTKADKNFFFIDEGFGTQDV
ESVNVVFETLMSLQKENRIVGIISHVEELKEKIPVSLNIIKDEERGSLIEIV
NT seq
3039 nt
NT seq
+upstream
nt +downstream
nt
atgattccgattaaactaacaatagagggactttattcttatcaggagcggcagacaata
gattttaaaaatcttacagaagctggcttgtttggaatcttcgggtccgtaggatccgga
aagtcttcaattcttgaggcaatttcttttgttttatatggagaaactgaacgtctgaat
atgcgtgacaaaagagcttacaatatgatgaatctgaaatctaacagctcttatattgaa
tttgatttcgtcagccatgaaaataaacttttccgggtagccagagactttagacgaaac
tccaaaaagtttgatgacgtaaagccttcttctgttactttctatgaaaacattaatgaa
aaatggattcctctggatcattctaatgcagaacaaattataggactaagctatgctaat
ttcaaacgtacgattatcattccccaaggccagtttaaagaattcttagaattgggggct
gcagagcgaacccatatgatgaaagaaatttttaatcttcagcgctttgatctgcagaat
aatgtttctgccttatatgcccgaaacagatccgaacttgatcagttacaaggggagtta
aaaggttttgaagaaataaatgaagaacagcttaagtcccaaaaagaaaaacttaaagaa
gagcagcaaaaatttgatgaggtaaaaaaagagcatcttcatatttcagaaaaataccaa
cagctaaagaatctaaaaactgattttgaaaatcttcagcagaagaaagaaaactttctg
aaagtatcttctgaaaaagaaaaaatcgacgaattagagaagaaaaccaatctttatgat
accgtatacagggtttttcatcctttattactagaaaaagataagctgtcaaatgaaatt
ttatccaagagaaaagatcatgaaagccatacaaaatcattacatgaaacagaaaaagtc
ttcaataaaatacaagagcagcttcacctcatccaacccaagtttgaggctttaaacgta
accaaaatacaagaaagcgacctcaacctgattcttcaaataatgaaattttcaaaagag
atcagtacgcttgaagaaagaactaaaaaaggatcggaaaaggtaaatgaagtaaaagag
aaacaacaaactattcaaaagaaagtagataccttatctaaggagctggaagcactaaag
cctcaaaagctagatgctaacctattacttaatgttgccaattggtttgttcataaaaag
agcctgatctctcagcagcaaaagcagactcaaaagcttattgtgcaaaaagagtctatt
caaaagattacagacgagctgaaactactggaggtagacactgatacttttagagagaaa
tttaaaataaaatctgacgctttagaagctaataaaaaagaattatctcagaaacttgac
catttaaaattacaaaaagaactatcccgttttgccagcgaattacatgcaggagaatcc
tgtccgctttgcggttccctggaacatccgaatattatagaatttcatgatgtcaataaa
gaaatccaggaaattcaggagaaaacacaatctattgaacatgagatttcaaaaattcag
aaccaaaagacagatattgaaaaaattctggatcggagaaatatatttgaggctcagctg
caatcggagcaaagtgttttagaaattcttcagaatgagcttaaggatcattaccaaaaa
tttgtttggttagatttcaatgctgacaacgaaagcgagtttgaagccaaacgtcaacaa
tcgtctgttatagaaaaacaaattgaagaaatcaaccaccaaatttcgcaagaaagagaa
gcccttgaaaaggaacgggaaaaccttgaaaaatataataaagctttagaagagtttaaa
cttgaagaagcaaaaaaagaagaacaaatcaataccaaccgttctaatttaaaaaactta
gactggaatgaatacaaagaaaaagaatattctgaagttgaaatcctgtatcagcagtta
gctcaatctaatattgaaacagaaaaaaattacttaagcctcactcagcaggaaaaagaa
acctctcccaaactgacagaacagcaaaccatcgttactcaattaaacaacaggatttca
gagttagaaagagaaatagcttctcataatcaaatcctggaaaaagctttatcagaaaaa
agctttcattcaatagctgatgttcagggtattttaagccaggaaatttcagttcaggag
acaagaaaccagattcaggcattcaggattcagtttgaaactttaaaaaacagcattcat
gaattagagacaaaacttaaggatttttcttttgatcaggagcagtttgataagattgaa
aaccagtttaagagtgtcgagataaatctacaacaaaccaatgatgcagtggtaaaagta
atttctgaaattgaaagactggaaaaagaattcctgaaaaaagaaagtttgctgaaagag
ctttctgaacttcaaaaacggtctgaaaatttaaaagtgattactaatctatttaaagcc
tccggttttgtacaatatgtgtcatctatttatttgaggcaattatgcgatcatgcgaat
gtccgttttcacagaatgaccagaagccagctgagccttcagcttaatgacaataatgat
tttgaaatcatcgattaccttaatgaaggaagaagccgaagtgtaaaaacattatccgga
gggcaggctttccaggtatcactaagcctcgcattagctttggcagaaagtgtacaggct
actacaaaagctgacaaaaatttcttttttatagatgaaggatttggtacccaggatgta
gagtctgtaaacgttgtttttgaaacattaatgagtctgcagaaagaaaacagaattgta
ggaatcatctcacacgtagaggagcttaaagaaaagattcctgtttctttgaatatcata
aaagatgaagaacgtggaagtttaatagaaatagtttag
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