Comamonas piscis: HS961_00245
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Entry
HS961_00245 CDS
T11249
Name
(GenBank) ligand-gated channel protein
KO
K16089
outer membrane receptor for ferrienterochelin and colicins
Organism
cpis Comamonas piscis
Brite
KEGG Orthology (KO) [BR:
cpis00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cpis02000
]
HS961_00245
Transporters [BR:
cpis02000
]
Other transporters
Pores ion channels [TC:
1
]
HS961_00245
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Ortholog
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GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
OMP_b-brl_4
BBP2
Motif
Other DBs
NCBI-ProteinID:
QMV75550
UniProt:
A0A7G5ENH5
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All DBs
Position
complement(53442..55361)
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AA seq
639 aa
AA seq
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MLVHGAAAAQAADAAEPTAPEKTLGTVVVTAAGFEQEVTQAPASITVIPREKLEQGAYSN
LHDALRDVPGVIMTPSDNNSNDISLRGMGANYTLILVDGKRMSTRETQTNGSTGTDQSWV
PPLEAIERIEVVRGPMSSLYGSDAMGGVVNIITRKVAKQWHGSLRADATLQERSESGNAY
QSNFYLSGPIKEELLGISLYGNYSKRDEDRIYQGYNDSDTKALNARIALTPNKDHDIIAE
LGSAKQHFISTPGKTLLETGELSDRKFERENYSLQHKGRWGWASSDTYVQHEKTRNISRE
MTIKNTVANSSWVLPVGEAHIVSTGLYYNKQDLTDTTTNTLPGSNRTTANRTQYAWFVED
EWRLREDFALTGGLRFDDDSKGGSQWSPRLYGVWNLNPRWTVKGGVSTGFRAPSLRQTLG
DWGQASRGGNIYGNPDLKPEKSLSKEVGVLYNDGAGLSAGLTVFDNDFRDKITRIACPEC
GPLNASGNTPTTNINIDKAVTRGIEATLTMPLARSLDLNSSYTFTKSEQKSGEFAGQPLS
QLPRHMLNVALDWKPSDRWNGWTKLSYRGKESQPTGGRSSRTWVAGSYAMFDVGGSFHYN
KNTTFFAGIYNLFDKDVYYEDYATVQDGRRYWVGMNLKF
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
atgctggtccatggcgctgcggcagcgcaagcggccgatgccgcagagccaacggccccc
gaaaagacgctgggcaccgtggtggtgacggcggcaggctttgagcaagaggtaacccag
gcaccggcatcgatcaccgtgatcccgcgcgagaagctggagcagggcgcgtacagcaac
ttgcacgatgccctgcgcgatgtgccgggcgtcatcatgaccccgtcggacaacaactcc
aacgacatcagcctgcgcgggatgggtgccaactacaccttgatcctcgtggatggcaag
cgcatgagtacgcgcgagacgcagaccaatggctcgacgggaactgaccaaagctgggtg
ccgccgctcgaagccattgagcgcatcgaggtggtgcgcgggcccatgtcctcgctttac
ggatcggatgcgatgggcggcgtggtgaacatcatcacgcgcaaggtggccaagcagtgg
catggctcgctgcgcgccgatgccaccttgcaagagcgctccgaatccggcaatgcctac
cagagcaacttctacctgtcgggcccgatcaaggaagagttgctgggcatcagcctctac
ggcaactacagcaagcgcgacgaagaccgcatctaccagggctacaacgacagcgacacc
aaggcgctcaacgcccgcattgcgctgaccccgaacaaagaccacgacatcattgccgag
ctgggctcggccaagcagcactttatctccacccccggcaaaaccttgctggagacgggc
gagctgtcggaccgcaagttcgagcgcgagaactactctttgcagcacaaaggccgctgg
ggctgggcctcgtcggatacctatgtgcagcatgagaagacccgcaacatctcgcgcgag
atgaccatcaagaacacggtggccaacagcagctgggtgcttccggtgggcgaggcgcac
atcgtcagcaccggcctgtactacaacaaacaggacctgaccgacaccaccaccaacacc
ttgcccggcagcaaccgtaccaccgccaaccgcacccagtacgcctggtttgtcgaagac
gaatggcgcctgcgcgaggactttgcgctgaccggcggcctgcgttttgacgacgacagc
aagggtggatcgcagtggagcccgcgcctctatggcgtgtggaacctgaacccgcgctgg
accgtcaagggcggcgtctccaccggcttccgcgcgccatccttgcgccagaccctgggc
gactggggccaggccagccggggcggcaatatctatggcaacccggatctgaagccggag
aaatcgctgtccaaggaagtgggggtgctctacaacgatggtgccggcctgtcggccggt
ctgaccgtgtttgacaacgacttccgcgacaagatcacccgcattgcctgcccggaatgc
ggtcccttgaatgcgtccggcaacacgcccaccaccaatatcaatatcgacaaggcggtg
acgcgcggcatcgaggcaacgttgaccatgccgctggcgcgcagcctggatctgaactcc
agctacaccttcaccaagtcggagcaaaagagcggcgagtttgctggccagccgctgtcg
cagctgccgcgccacatgctcaatgtcgccctggattggaagccgtctgaccgctggaac
ggctggaccaagctgtcctaccgtggcaaggaaagccagcctaccggcggccgctcctcg
cgcacctgggtcgctggcagctatgccatgttcgatgtgggtggctcgttccactacaac
aagaacaccactttcttcgccggtatctacaacctgtttgacaaggatgtgtactacgaa
gactacgccaccgtgcaggacgggcgccgttactgggtcggcatgaacctgaagttctaa
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