Comamonas piscis: HS961_02125
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Entry
HS961_02125 CDS
T11249
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
cpis Comamonas piscis
Pathway
cpis03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cpis00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HS961_02125 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpis03019
]
HS961_02125 (recQ)
03400 DNA repair and recombination proteins [BR:
cpis03400
]
HS961_02125 (recQ)
Enzymes [BR:
cpis01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HS961_02125 (recQ)
Messenger RNA biogenesis [BR:
cpis03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
HS961_02125 (recQ)
DNA repair and recombination proteins [BR:
cpis03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
HS961_02125 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
Helicase_C
RecQ_Zn_bind
ResIII
HHH
Motif
Other DBs
NCBI-ProteinID:
QMV71726
UniProt:
A0A7G5ECK1
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All DBs
Position
457910..459841
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AA seq
643 aa
AA seq
DB search
MTSLAHTVLQDAFGYAHFRGSQQAIVDHVIGGDDALVLMPTGGGKSLCYQIPAIVRQQQG
HGTTIVISPLIALMHDQVSAMHEIGVDAAFLNSTLDYDQTRDVELQLLSGGITLLYVAPE
RLNTPRFLGLLDELHAMGKLALFAIDEAHCVSQWGHDFRPEYRELTVLHQRYAGVPRIAL
TATADALTRADIVERMQLESARVFISSFDRANIRYTIVEKKDASAQLLRFIEREHDGDAG
VVYCLSRKKVEEVAQTLCDAGVNALPYHAGLGAELRQKNQSRFLREEGIVMVATIAFGMG
INKPDVRFVAHVDMPKNIESYYQETGRGGRDGLPADAWMAYGYRDVVSQRSMIDESPAGD
AFKQVMRGKLDALLGLAEGTDCRRVRLLAYFDEVYGQGGDYDSAHPEASAASAEKAPRYQ
CGNCDNCLNPPKTWDGTDAARKLLSTIYRAHAASQVTFGATHILDIVRGKETDKVRQFSH
QQLSTFGLCQDYTEPQLRGVLRQLLAIGALATQKMQTEAGYSFETLVLCDGSRAVLRGEQ
TVELRESTAERSPSKRQRSTKPAVAAQNLGPDEQVRFINLKAWRTEVAKEHNVPAYVVFA
DATLAAIAQRNPQSLDELQGVSGIGVKKLEAYGEAVLRVCGAE
NT seq
1932 nt
NT seq
+upstream
nt +downstream
nt
gtgacttccctcgcccacaccgttttgcaggatgcctttggctatgcgcactttcgcggc
tcgcagcaagccattgttgaccatgtgatcggcggcgacgatgcgctggtgctgatgccc
accggcggcggcaaaagcctgtgctaccaaatcccggccatcgtgcgccagcagcagggc
cacggcaccaccatcgtcatctcgcccctgatcgcgctgatgcacgaccaggtcagcgcc
atgcacgagatcggtgtggacgccgccttcctcaattccaccctcgactacgaccagacc
cgcgatgtggagctgcaactgctgtcgggcggcatcaccttgctgtatgtggcgcccgag
cggctcaacaccccgcgctttctgggcctgctcgatgagctgcatgcgatgggcaagctg
gccctgttcgccatcgacgaggcccattgcgtcagccagtgggggcatgactttcggccc
gagtaccgtgagctgaccgtgctgcaccagcgctatgccggcgtgccgcgcattgcgctc
accgccacggccgatgcgctgacccgcgccgacattgtcgagcgcatgcagctcgaatcg
gcgcgcgtcttcatcagcagctttgaccgcgccaacatccgctacaccatcgtcgagaaa
aaagacgcctccgcccagctgctgcgctttatcgagcgcgagcacgatggcgatgctggc
gtggtgtattgcctctcgcgcaaaaaggtggaggaagtcgcgcaaaccctgtgcgatgcc
ggcgtcaacgccctgccctaccacgccggcctgggcgccgagctgcggcaaaaaaaccaa
agccgttttctgcgcgaagaaggcattgtgatggtcgccaccatcgcgttcggcatgggc
atcaacaagcccgatgtgcgctttgttgcccacgtcgacatgcccaagaacatcgagagc
tactaccaggaaaccggccggggcggccgcgacggcctgcccgccgatgcctggatggcc
tatggctaccgcgacgtagtcagccagcgcagcatgatcgacgagagcccggccggtgat
gccttcaagcaggtgatgcgcggcaagctcgatgcgctgctcggcctggccgaaggcacc
gactgccggcgcgtgcgcctgctggcctattttgacgaggtctatggccagggcggcgat
tacgactcggcccaccccgaggcatccgccgcatccgccgagaaggcgccgcgctaccag
tgcggcaactgcgacaactgcctgaacccgcccaaaacctgggacggcaccgacgccgcg
cgcaagctgctgtccaccatctaccgcgcccacgccgccagccaagtcacctttggtgcc
acccatatcctcgacatcgtgcgcggcaaggaaaccgacaaggtgcgccagttcagccac
cagcagctgagcacctttggcctgtgccaggactacaccgaaccccagctgcgcggcgtg
ctgcgccagctgctggccattggcgcactggccacccaaaaaatgcagaccgaggccggc
tacagctttgagaccctggtgctgtgcgacggctcacgcgccgtgctgcgcggcgagcaa
accgtggagctgcgcgaaagcaccgccgaacgcagccccagcaaacgccagcgcagcacc
aaacccgccgtcgccgcgcaaaacctgggccccgacgagcaggtccgcttcatcaacctc
aaggcctggcgcaccgaagtggccaaggagcacaacgtgcccgcctacgtcgtcttcgcc
gacgctaccttggccgccatcgcccagcgcaatccgcagagtctggatgagctgcagggc
gtaagcgggattggggtgaaaaagctggaggcttatggggaggcggtgttgcgggtgtgt
ggcgccgaatag
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