Comamonas piscis: HS961_05480
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Entry
HS961_05480 CDS
T11249
Name
(GenBank) AAA family ATPase
KO
K03546
DNA repair protein SbcC/Rad50
Organism
cpis Comamonas piscis
Brite
KEGG Orthology (KO) [BR:
cpis00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cpis03400
]
HS961_05480
DNA repair and recombination proteins [BR:
cpis03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
HS961_05480
Archaeal homologous recombinant proteins
HS961_05480
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_29
ABC_tran
AAA_21
AAA_15
cobW
nSTAND3
RsgA_GTPase
NTPase_1
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QMV72322
UniProt:
A0A7G5EE97
LinkDB
All DBs
Position
complement(1213194..1216634)
Genome browser
AA seq
1146 aa
AA seq
DB search
MKIRKLRLKNLNSLKGEWCIDFTAAPFADNSLFAITGPTGAGKSTLLDAICLALYHQTPR
LATISTGSNDLMTRHTADCLAEVEFEVKGTVYRAFWSQRRARDKADGALQGPKVELARVA
DGVILSTHSSDKLRQMAEITGLDFQRFTKSMLLAQGGFAAFLEAKANERAELLEELTGTD
IYSQISQTVFERARDARQALERDKAQAGGMQLLPEAEREQLQTEAQQLQDTLASLQTRHV
ALQTLQRWQQQTAQAAQAQHQADERLQQAQQALQAAAPDLKRLQAHGPAQAIAPLHAGWQ
QAQAATAAGQAQLAQLQGRLADAHHQQWQLQQHTSALAQQAQQQAEHALQQLQTQQTELQ
HWLQQHPGHAALGDQLSGWREQLAQRQQQQRQLAQEQAALLQAQQQHQALQQQAAAQATE
LQQAQTAQQQADAAAHEAQTAQQSRLAPHGGSLVELRAHWQTAQQHQQAWQQLLQHAQQR
QPLARDGTQLGDALQACAAPLLQQQQALAALRSQYKAQKERLGDKQKLLAQEQRIQSLES
HRQALQPGEACPLCGAHEHPAIAAYAALDVTATEAALQAAQAELETLQQQGEQLSAAHAA
ALSQQTSLQAQLTAAEQRLAQWQQAWQELATHMAQPIAESAWQQPQVLADAQQASAAHAA
QLQQALAAAEAAEQALQRAKDTAHTTAQALQHAQHQQAQLQRSQQDNSAQQQRLIQAVQD
LQALAGTTEAALQSSLAPLGLPLPAAADAGTWLQTRQQEWQQWQQRSAQLHTIAQQLALQ
QHQASQCAQEAQQWQLRLAQSQAPAQKGAASMALPATLADCAALLEQTRQTLASLEGQIQ
QAGQQLAERQWVETQALTAWNKGLQASPFADAPAFAQALLPAAELAQLTQQRDGLQQTLQ
RASTVADEAAQQHQQLQAQALTEEAPEALDGHLQALEEERNQTAERMGAHRARLADDAQR
RAGQQALLAQIALQEQDSDLWQRLDGLIGSAKGDKYRKFAQGLTLDHLLALANGHLARLH
GRYLLQRKTTGELELDIVDSWQGDVARDTRTLSGGEAFLVSLALALALSDLVSSKTSIDS
LFLDEGFGTLDGDTLEIALTALDTLNASGKMIGIISHVEALKERIPAQIRVEKGAGIGYS
RLELQH
NT seq
3441 nt
NT seq
+upstream
nt +downstream
nt
atgaagatacgcaagctgcggctgaaaaacctgaactcgctcaaaggcgagtggtgcatt
gactttacggcggcgccctttgctgacaacagcctgtttgccatcacggggcccacgggc
gctggcaaatcgaccttgctggatgccatttgcctggcgctctaccaccagacgccccgg
ctggcgaccatcagcaccggcagcaatgacctgatgacgcgccacacggcggactgcctg
gcagaggtggagtttgaagtcaaaggcactgtttaccgcgccttctggagccagcgccgc
gcccgcgacaaggccgacggcgcactgcaaggccccaaggtggaactggcgcgcgtggcc
gatggcgtgatcctgagcacccatagcagcgacaagctgcgccagatggccgagatcacc
gggctggattttcagcgctttaccaaatcgatgctgctggcccagggcggctttgcagca
tttttggaggcaaaagccaatgagcgcgctgagctgctcgaagagctgacggggaccgac
atttacagccagatttcgcagaccgtgtttgagcgcgcccgcgatgcccgccaggcgctg
gagcgcgacaaggcccaggcgggcggcatgcaactgctgcccgaggccgagcgcgaacag
ctgcaaacggaagcccagcagctgcaagacaccctcgccagcctgcaaacgcgccatgtt
gcgctgcaaactttgcagcgctggcagcagcaaactgcacaagcggcgcaggcgcagcac
caggccgatgagcgcctgcagcaggcccaacaagcactgcaggctgccgcccctgatctg
aaacgcctgcaggcccatggccctgcgcaagcgattgccccgctgcatgcgggctggcag
caggcgcaagcagccaccgcagcgggccaagcccagctggcgcaattgcagggccgcctc
gccgatgcccaccaccagcaatggcagctgcagcagcacaccagtgcgctggcgcagcag
gcccagcagcaggcagaacacgcactgcagcagctgcaaacccagcagaccgagcttcag
cactggctgcagcagcaccccggccatgctgcattaggcgaccagctgagcggctggcgc
gagcagctggcgcagcgacagcagcaacagcggcagttggcacaagagcaggccgcgttg
ctgcaggcccaacaacagcaccaggcgctgcagcagcaagcagccgcacaggccaccgaa
ctacaacaggcccaaacagcgcagcaacaggcagatgcagcagcgcacgaggcccagaca
gcgcaacaaagccgcctggcaccgcatggcggcagcctggtcgagctgcgcgctcactgg
caaacggcccaacagcaccagcaagcctggcagcagctgctgcagcatgcccagcaacgc
caaccgctggcgcgggatggcacgcagttgggtgatgcactgcaggcctgtgcggcaccc
ctgctgcaacagcaacaggcattggcggccttgcgcagccagtacaaggcccagaaagag
cggttgggcgacaagcaaaaactgctggcccaggaacagcgcatccaaagcctggaatcc
caccgccaggccttgcaaccgggagaggcctgcccgctctgcggcgcccatgagcaccct
gcgattgctgcctatgcggcgctcgatgtgaccgccaccgaagcagcgctgcaagcggcc
caggccgagctggaaacgctgcaacaacaaggtgagcagctcagcgccgcgcatgctgcc
gctctgagccaacaaaccagcctgcaggcccaactgacagcggccgagcagcgcctggcg
caatggcagcaggcatggcaggaactcgccacacacatggcgcagcccatcgccgaatct
gcctggcagcagccacaggtattggctgatgcgcagcaagccagcgccgcccacgctgcc
cagctgcagcaggcgttggcggcggccgaagcggcagagcaagcgctgcaacgcgccaaa
gacaccgcccataccaccgcacaggccttgcagcatgcccagcaccagcaagcacagctg
cagcgcagccagcaagacaacagcgcgcagcagcagcggctgatccaagcggtgcaagac
ctgcaggccctggccggtacaacggaggcagcgctgcaatccagcctggccccgctgggc
ctgcccttacccgcagcggccgatgccggtacctggttgcagacccgccagcaggaatgg
cagcagtggcaacagcgcagcgcgcagttgcacaccatcgcccagcaactggcgctgcag
cagcaccaggccagccagtgcgcgcaagaggcccagcaatggcagctgcgcctggcgcaa
tcgcaggctcccgcgcaaaaaggtgctgcaagcatggcgctgcccgctacgctggcggat
tgcgcagcgctgctggaacagacccgccaaacgctggccagcctggagggccagatccag
caagcgggccagcaactggccgagcggcaatgggttgagacgcaggctctgaccgcttgg
aacaagggcctgcaagcgagcccctttgccgatgcacccgcctttgcgcaagcgctgctg
ccagccgccgagctggcccagctcacacagcagcgcgatgggctgcagcaaacgctgcag
cgcgccagcaccgtggccgatgaagcggcgcaacagcaccagcaactgcaggcccaggcc
ttgacggaggaagcacccgaagctctggatgggcacttacaggcgctggaggaagagcgc
aaccagacggcagagcgcatgggcgcccaccgcgcgcgcctggccgatgatgcgcagcgc
cgcgcagggcagcaggcgctgttggcgcagattgcgctgcaagaacaggacagcgatctg
tggcaacggctcgatggcctgattggctcggccaagggcgacaagtaccgcaagtttgcc
cagggcctcaccctggaccatttgctggcactcgccaacggccatctggcgcggctgcat
ggccgctacctgctgcagcgcaaaacgacgggcgagctggagctggatatcgtcgacagc
tggcaaggcgatgtagcgcgggacacgcgcaccttgtcgggtggcgaggcgttcctggtc
agcctggcattggcacttgcgctgtccgatttggtcagcagcaagacctccatcgattcg
ctgttcctggacgaaggctttggcaccttggatggcgacaccttggagatcgcgttgacg
gcgctggacacgctgaacgccagcggcaagatgatcggcatcatcagccatgtggaggcg
ctcaaggagcgcattccggcgcaaatccgggtggagaagggggcggggattggatattcg
cgtttagaacttcagcactga
DBGET
integrated database retrieval system