Comamonas piscis: HS961_06110
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Entry
HS961_06110 CDS
T11249
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
cpis Comamonas piscis
Pathway
cpis02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
cpis00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
HS961_06110
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cpis02000
]
HS961_06110
Transporters [BR:
cpis02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
HS961_06110
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
TAT_signal
Motif
Other DBs
NCBI-ProteinID:
QMV72443
UniProt:
A0A7G5EEL8
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All DBs
Position
1365989..1367611
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AA seq
540 aa
AA seq
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MSIDSDFSLATRRHFMLAAAATGIGTAVPSLAWAQDKPQKGGTLNLLLFPEPPTLTTIAH
TAGSSVTISGKVTEGLLTYDFNLNPQPQLAVAWSISPDGLVYRFQLRQGVKWHDGKPFTS
ADVVHSIALLKEFHPRGRATFAGVAEVQAPDAHTVVLQLSRPIPYLITALAASESPIVPK
HLYSSGRADTNPANNAPVGTGPFVFKEWVRGSHVIYERNPHYWDGDKPYIDRLVVRFIPD
AAARTAAIESGQVQIAPSSPVPFAEVERLRAKPGLQFETRGYEYINSVYRLEFNLESEPL
KDLRVRQAIAHALQRENLLKVAWYGQGKLTTGPVHPALKKFYVPDLPVLPYDLKRAEKLL
DEAGLTRGKAGGQWRARLNLTPIPNEGGQRTGDFLKQALGRIGIDVQINSQDFATYIKRI
YTDRAFDLHVSAMSNTFDPTVGIQRLYWSKSFQRGLPFSNGAHYASPEVDRLLESAAVEM
NEAQRIREVAEFQKHIATDLPDITLVAPDIYTIADKRVRNHTVGADGVAGNLAGVWLAAS
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atgtctattgattccgatttctcgctcgccacgcgccgccactttatgctggccgctgct
gccaccggcatcggcacggcagtccccagcctggcctgggcgcaggacaagccgcaaaag
ggcggcaccttgaacctgctgctcttccccgagccgccgaccctgacgacgattgcgcac
accgcaggctcgtcggtgacgatatcgggcaaggtgacggaggggctgctgacctatgac
ttcaacctcaacccgcagccgcagctggccgttgcctggtccatcagccccgatggcctg
gtctaccgcttccagctgcgccagggtgtcaaatggcatgacggcaagccctttacttcg
gccgacgtggtgcactcgattgcgctgctcaaggagttccacccccggggccgcgccacc
tttgccggggtggccgaggtgcaggcccccgatgcccacaccgtggtgctgcagctgagc
cggcccatcccgtacctgatcacggcgctggcggcctcggagtcgcccatcgtgcccaag
cacctgtattccagcggacgggccgataccaacccggccaacaatgcgccggtgggcacg
ggcccctttgtgttcaaggaatgggtgcgcggcagccatgtgatctacgagcgtaatccg
cattactgggatggcgacaagccctatatcgaccggctggtggtgcgctttatccccgat
gccgctgcgcgcacagcggccatcgaaagcggccaggtgcagattgcgcccagctcacca
gtgccctttgccgaggtggagcgcctgcgcgccaagccgggcctgcagttcgagacccgg
ggctatgagtacatcaacagcgtctaccggctggagttcaacctggagagcgagccgctc
aaggacctgcgcgtgcgccaggccattgcccatgcgctgcagcgcgagaacctgctcaag
gtcgcctggtatggccagggcaagctgaccaccgggccggtgcacccggcgctgaagaag
ttctatgtgcccgatctgccagtgctgccctatgacttgaagcgcgccgagaagctgctg
gatgaggccggcctgacgcgcggcaaggccggcggccagtggcgtgcccggctgaacctg
acccctatccccaacgagggcggccagcgcactggcgatttcctcaagcaggcgctgggc
cgcatcggcatcgatgtgcagatcaacagccaggactttgccacctacatcaagcgcatc
tacaccgaccgggcctttgacctgcatgtgagcgcgatgagcaacacctttgacccgacg
gtgggcatccagcggctgtactggtccaagagctttcagcgcgggctgccgttctcgaac
ggcgcgcattacgccagccccgaggtggaccgcctgctggaatctgccgccgtcgagatg
aacgaggcccagcgcatccgcgaggtggccgagttccagaagcacatcgccaccgacctg
cccgacatcaccctggtcgcccccgacatctacaccattgccgacaagcgcgtgcgcaac
cacaccgtgggtgcggatggcgtggccggcaacctggccggcgtctggctggccgcgtcc
tga
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