Comamonas piscis: HS961_07780
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Entry
HS961_07780 CDS
T11249
Symbol
truA
Name
(GenBank) tRNA pseudouridine(38-40) synthase TruA
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
cpis Comamonas piscis
Brite
KEGG Orthology (KO) [BR:
cpis00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cpis03016
]
HS961_07780 (truA)
Enzymes [BR:
cpis01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
HS961_07780 (truA)
Transfer RNA biogenesis [BR:
cpis03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
HS961_07780 (truA)
Prokaryotic type
HS961_07780 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
QMV72748
UniProt:
A0A7G5EFH3
LinkDB
All DBs
Position
complement(1733094..1733912)
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AA seq
272 aa
AA seq
DB search
MRIAMGITYNGQAYQGWQSQLSGITVQDHLEAALSRFAASPISTNCAGRTDAGVHGLMQV
VHFDSPVARAEASWVRGTNTFLPKDIAVQWVRTVPDDFHSRACATSRRYGYALLQSPVRP
SVEAGRVGWVYQPLDLEPMQRAVQYLLGEHDFSSFRAAGCQAKSPVKTLYAIHIARSTQR
PSASRDGMPSCYWRFDFQGSAFLHHMIRNIMGCLVVIGQGAQPPEWMLEVLNARSRKVAA
PTFSPDGLYFLGPQYDPRWGLPTEAISFDWFA
NT seq
819 nt
NT seq
+upstream
nt +downstream
nt
atgcgaatcgccatgggcatcacctacaacggacaggcctaccaaggctggcaaagccag
ctcagcggcatcactgtccaagaccatcttgaagcggcgttgagccgctttgccgcctcc
cctatctccaccaactgcgctggacgcaccgatgccggtgtacacggcctcatgcaggtg
gtgcattttgactcgcctgttgcgcgcgctgaggcatcctgggtgcgaggcaccaacact
tttttgcccaaggacatcgctgtccagtgggtgcgcacggtacctgatgacttccacagc
cgcgcttgcgccacatcgcggcgctatggctatgcgctgctgcagtcaccggtgcgccct
agcgtcgaggctggccgtgtcggctgggtgtaccagccgttggacctagagcccatgcag
cgcgccgtgcagtacctgctgggcgagcatgatttttcgtcgttccgtgcggcaggctgc
caggccaagtcgccggtcaaaaccttgtatgccatccacattgccaggagtacgcaacgg
cccagcgcctcgcgcgatgggatgccatcctgctactggcgttttgatttccagggcagc
gccttcttgcaccacatgatccgcaacatcatggggtgcttggtcgtgattggccaggga
gcccaaccgcctgagtggatgctggaggttctcaatgcccgcagccgcaaggtcgcggcc
cccacgttctcaccggatggcctctatttcctcggcccccaatacgatccgcgctggggc
ttgcccaccgaggccatctcttttgactggtttgcctga
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