KEGG   Comamonas piscis: HS961_08565
Entry
HS961_08565       CDS       T11249                                 
Name
(GenBank) 3'-5' exonuclease
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
cpis  Comamonas piscis
Pathway
cpis03030  DNA replication
cpis03430  Mismatch repair
cpis03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:cpis00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    HS961_08565
   03430 Mismatch repair
    HS961_08565
   03440 Homologous recombination
    HS961_08565
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:cpis03032]
    HS961_08565
   03400 DNA repair and recombination proteins [BR:cpis03400]
    HS961_08565
Enzymes [BR:cpis01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     HS961_08565
DNA replication proteins [BR:cpis03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     HS961_08565
DNA repair and recombination proteins [BR:cpis03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     HS961_08565
SSDB
Motif
Pfam: RNase_T Rv2179c-like YdfZ DEDDh_C RNase_H_2
Other DBs
NCBI-ProteinID: QMV72889
UniProt: A0A7G5EFW4
LinkDB
Position
complement(1923231..1923932)
AA seq 233 aa
MSERIAILDFETTGMSPAHGARAAEVGIVMVENGRIVDRYQNLMNAGQRMPSFITQLTGI
TTAMLQAAAPAEQVMREAADFVGTAPLVAHNASFDSKFWRDELERAGCIASAAAAPVGSL
FACTVLLSRRLYPEAPSHSLGKIVRHLQLPPADKAHRALADAEMTAHLLLRMQADLRSRW
HIPDPSHALLSELQVCQRKHLGRWFSTTSAQQTQPQLPELAHTLLPKAIAALR
NT seq 702 nt   +upstreamnt  +downstreamnt
atgtccgaacgcatcgccattctcgactttgaaaccaccggcatgagcccggcgcatggc
gcgcgggcggccgaggtcggcattgtcatggtcgagaacggccgtatcgtcgatcgctac
cagaacctgatgaacgccggccagcgcatgcccagcttcatcacccagctcaccggcatc
accacggcgatgctgcaggcggcagcgcccgccgagcaggtgatgcgcgaggcggcggac
tttgtcggcacggcgccgctggtggcacacaacgcatcgtttgacagcaagttctggcgc
gatgagctggaacgtgccggctgcatagcttcagccgcagccgcgcctgtcggcagtctg
tttgcctgcacggtattgctgtcgcgccgcctctaccccgaggcacccagccactcgctg
ggcaagatcgtgcgccacctgcaactgccccccgccgacaaggcccaccgggcactggcc
gatgccgagatgacagcccacctgttgctgcgcatgcaggccgatctgcgcagccgctgg
catatccccgaccccagccatgcgctgctgagcgaactgcaggtctgccagcgcaagcac
ctggggcgctggttcagcaccacctcagcgcagcaaacccagccgcaattgcctgagctg
gcccacactttgctgcccaaggctatagcagcactgcgctga

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