Comamonas piscis: HS961_08565
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Entry
HS961_08565 CDS
T11249
Name
(GenBank) 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
cpis Comamonas piscis
Pathway
cpis03030
DNA replication
cpis03430
Mismatch repair
cpis03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cpis00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HS961_08565
03430 Mismatch repair
HS961_08565
03440 Homologous recombination
HS961_08565
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cpis03032
]
HS961_08565
03400 DNA repair and recombination proteins [BR:
cpis03400
]
HS961_08565
Enzymes [BR:
cpis01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HS961_08565
DNA replication proteins [BR:
cpis03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HS961_08565
DNA repair and recombination proteins [BR:
cpis03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HS961_08565
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
YdfZ
DEDDh_C
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
QMV72889
UniProt:
A0A7G5EFW4
LinkDB
All DBs
Position
complement(1923231..1923932)
Genome browser
AA seq
233 aa
AA seq
DB search
MSERIAILDFETTGMSPAHGARAAEVGIVMVENGRIVDRYQNLMNAGQRMPSFITQLTGI
TTAMLQAAAPAEQVMREAADFVGTAPLVAHNASFDSKFWRDELERAGCIASAAAAPVGSL
FACTVLLSRRLYPEAPSHSLGKIVRHLQLPPADKAHRALADAEMTAHLLLRMQADLRSRW
HIPDPSHALLSELQVCQRKHLGRWFSTTSAQQTQPQLPELAHTLLPKAIAALR
NT seq
702 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaacgcatcgccattctcgactttgaaaccaccggcatgagcccggcgcatggc
gcgcgggcggccgaggtcggcattgtcatggtcgagaacggccgtatcgtcgatcgctac
cagaacctgatgaacgccggccagcgcatgcccagcttcatcacccagctcaccggcatc
accacggcgatgctgcaggcggcagcgcccgccgagcaggtgatgcgcgaggcggcggac
tttgtcggcacggcgccgctggtggcacacaacgcatcgtttgacagcaagttctggcgc
gatgagctggaacgtgccggctgcatagcttcagccgcagccgcgcctgtcggcagtctg
tttgcctgcacggtattgctgtcgcgccgcctctaccccgaggcacccagccactcgctg
ggcaagatcgtgcgccacctgcaactgccccccgccgacaaggcccaccgggcactggcc
gatgccgagatgacagcccacctgttgctgcgcatgcaggccgatctgcgcagccgctgg
catatccccgaccccagccatgcgctgctgagcgaactgcaggtctgccagcgcaagcac
ctggggcgctggttcagcaccacctcagcgcagcaaacccagccgcaattgcctgagctg
gcccacactttgctgcccaaggctatagcagcactgcgctga
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