Comamonas piscis: HS961_08855
Help
Entry
HS961_08855 CDS
T11249
Symbol
pcnB
Name
(GenBank) polynucleotide adenylyltransferase PcnB
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
cpis Comamonas piscis
Pathway
cpis03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cpis00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HS961_08855 (pcnB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpis03019
]
HS961_08855 (pcnB)
Enzymes [BR:
cpis01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
HS961_08855 (pcnB)
Messenger RNA biogenesis [BR:
cpis03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
HS961_08855 (pcnB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol_arg_C
PolyA_pol
PolyA_pol_RNAbd
Gad2
Slu7
VTC
DUF2204
Motif
Other DBs
NCBI-ProteinID:
QMV72941
UniProt:
A0A7G5EG16
LinkDB
All DBs
Position
1993704..1995326
Genome browser
AA seq
540 aa
AA seq
DB search
MIKNIIDKLLGKATAASKPKNPFGKREEVGVDVHKIDPAMVDRRAVDVCSTLKEAGFEAY
IVGGAVRDLLLGLRPKDFDVATNATPEQVKSLFRRAFIIGRRFRIVHVVYGRGRENEVIE
VTTFRAFLDSSKAEQVQGNEKTSRAALAGMKLAVDESGRVLRDNVWGPQNEDAARRDFTV
NAMYYDPQTQIVVDYHKGIRDAQKLVLRMIGDPTTRYREDPVRIIRAVRFAAKLSKKGFT
IDPKTAKPLVECAQLLQEVPQSRMFDEMLKLLQTGHSLASIEQLRHLGLAKGIYPLLDVV
VDRANLPFVQAALMDTDRRVAEGKSVAPSFLLACVLWQDVKTGWDSRMARGEHPHPALQD
AIDDVFNHRIGDVSGRGKLAADMREIWVMQPRFEKRTGSTPFGMIAQARFRAGFDFLRLR
ADVAEVDEALANWWQEFQQADEARREDLIAQVREEQRAKPKTGAAKPKRAPRKPAAASGG
AGSAGGEQEAGSSSSLDQVAQQAFESDDADAVDAPVKKRRRRRRKPGNAEGGTSAAADTE
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atgatcaaaaatatcattgacaaactgctgggcaaggctactgccgccagcaaacccaag
aacccctttggcaagcgcgaggaggtgggcgtcgatgtccacaagatcgaccccgcgatg
gtcgaccgccgggcagtagatgtctgcagcacgttgaaagaggctggctttgaggcctat
atcgtcggcggcgccgtgcgcgatctgctgctgggcctgcgccccaaggattttgacgtg
gccaccaatgccacgcccgagcaggtcaagagcctgttccgccgcgccttcatcattggg
cggcgcttccgcatcgtgcacgtggtctacggccggggccgcgagaacgaggtgatcgaa
gtcaccaccttccgtgcgtttttggacagctccaaggccgagcaggtgcagggcaacgag
aagaccagccgggccgcgctggcgggcatgaagctggcggtggacgaaagcggccgcgtg
ctgcgcgataacgtctggggcccgcagaacgaggacgcagcgcggcgcgacttcaccgtc
aacgccatgtactacgatccgcagacccagatcgtggtggactaccacaagggcatccgc
gatgcccaaaagctggtgctgcgcatgattggcgacccgaccacccgctaccgcgaagac
ccggtgcgcatcatccgcgcggtgcgctttgccgccaagctcagcaagaagggtttcacc
atcgatcccaagacggccaagcccctggtcgagtgcgcgcagctgctgcaggaagtgccg
caaagccgcatgtttgacgagatgctcaagctcttgcaaaccggtcactcgctggcatcg
atcgagcaattgcgccatctgggcctggccaagggcatctatccgctgctcgatgtagtg
gtggaccgtgccaacctgccttttgtgcaggccgcgctgatggacaccgaccgccgtgtg
gccgaaggcaagagcgttgcgccgagctttttgctggcctgcgtgctgtggcaggacgta
aaaaccggctgggacagccgcatggcacgcggtgagcacccgcaccctgcgttgcaggat
gccattgacgatgtgttcaaccatcgcattggcgatgtctcaggccggggcaagctggcc
gccgatatgcgcgagatctgggtgatgcagccgcgctttgaaaagcgcacaggcagcacg
ccgtttggcatgattgcgcaggcacgcttccgtgccggttttgattttctgcgtttgcgt
gccgatgtggcggaagtggacgaggcactggccaactggtggcaggagttccagcaggcc
gatgaggcccgccgcgaagacctgattgcccaggtgcgcgaagagcagcgtgccaagccc
aagactggcgcagccaagcccaagcgcgcccctcgaaagcccgcagcagctagcggcggc
gctggcagcgctggcggcgagcaagaagctggctcctcctccagcctggaccaggtcgcg
cagcaggcctttgaatccgatgatgcggatgccgtcgatgcgccggtcaaaaagcgccgt
cgccgccgccgcaagccaggtaatgctgaaggtggtaccagcgccgctgccgacacggaa
tga
DBGET
integrated database retrieval system
