Comamonas piscis: HS961_15680
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Entry
HS961_15680 CDS
T11249
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
cpis Comamonas piscis
Brite
KEGG Orthology (KO) [BR:
cpis00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cpis03016
]
HS961_15680 (truB)
Enzymes [BR:
cpis01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
HS961_15680 (truB)
Transfer RNA biogenesis [BR:
cpis03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
HS961_15680 (truB)
Prokaryotic type
HS961_15680 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
QMV74166
UniProt:
A0A7G5EJJ1
LinkDB
All DBs
Position
complement(3472063..3473055)
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AA seq
330 aa
AA seq
DB search
MKAPRTRVQRRPVHGVFLLDKPIGLSSNDALQKVKWLLRAEKAGHTGTLDPLATGVLPLC
FGAATKFSQLQLDAPKTYEALVHLGATTTTGDAEGEVMQIWEVDALALTPEKLAAVAAQF
TGAISQVPPMYSALKRDGKALYEYARAGITLEREPRAVTILHLALSRVEEEQAFTALKMT
VRCSKGTYVRTLAEDIGQALGYGAHLRSLRRIETGGIDLSRCVSLQTLEALPDDQRLQTV
LPADTLLAEHTRVTLDGDNAGRFLSGLRRRGEWADADAVAVYGEEPPALLGVAHIRAREL
IPDRLLSPVEIQQILEGTPRPQASGILETS
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atgaaagcccctcgcacacgggtgcagcggcgccctgtgcacggggtgtttctgcttgat
aaacccattggcctgtccagcaacgacgctttgcaaaaagtgaagtggctgctgcgcgcc
gaaaaagccggccacaccggcacgctcgatcctttggcgactggcgtgctgccgctgtgt
tttggcgcggcgaccaagttcagccaactgcaactcgatgcgcccaagacctacgaggcc
ttggtgcacctgggtgccaccaccaccaccggcgatgccgagggtgaggtgatgcagatc
tgggaggtcgatgcgctggccttgacgcctgagaaactggctgctgtggcggcccagttc
actggtgccatcagccaggtgccgccgatgtacagcgcgctcaagcgtgatggcaaggcc
ctttacgaatatgcccgagccggtatcacgctggagcgtgagccgcgtgccgtcaccatc
ttgcacctggcgctgtccagggtggaagaagagcaggcgtttaccgccctcaagatgacg
gtgcgatgcagtaagggaacctatgtgcgaacactggccgaagacattggccaggcgctc
ggctatggcgcgcatctgcgcagcctgcgccgcatagaaaccggtgggattgacctgtcc
cgctgtgtgagcctgcaaaccctcgaagcgctcccggatgaccagcgcctgcaaaccgtg
ttgcctgccgacaccttgctggccgagcacacccgtgtcacgctcgatggtgataatgca
ggcagatttctgtccggcttgcgccggcggggtgaatgggccgatgccgatgcagtggcc
gtttatggagaggagcctcctgcgcttttgggtgtggcacacatccgggcgcgcgagctc
atccccgaccgccttttaagccccgtcgagattcaacaaattttggaaggaacgccgcgc
ccacaagccagcggcattttggaaacatcatga
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