Comamonas piscis: HS961_21020
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Entry
HS961_21020 CDS
T11249
Symbol
aspS
Name
(GenBank) aspartate--tRNA ligase
KO
K01876
aspartyl-tRNA synthetase [EC:
6.1.1.12
]
Organism
cpis Comamonas piscis
Pathway
cpis00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
cpis00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
HS961_21020 (aspS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
cpis01007
]
HS961_21020 (aspS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cpis03016
]
HS961_21020 (aspS)
03029 Mitochondrial biogenesis [BR:
cpis03029
]
HS961_21020 (aspS)
Enzymes [BR:
cpis01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.12 aspartate---tRNA ligase
HS961_21020 (aspS)
Amino acid related enzymes [BR:
cpis01007
]
Aminoacyl-tRNA synthetase
Class II (A)
HS961_21020 (aspS)
Transfer RNA biogenesis [BR:
cpis03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
HS961_21020 (aspS)
Prokaryotic type
Other AARSs
HS961_21020 (aspS)
Mitochondrial biogenesis [BR:
cpis03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
HS961_21020 (aspS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
GAD
tRNA_anti-codon
tRNA-synt_2d
tRNA-synt_2b
DUF4388
Motif
Other DBs
NCBI-ProteinID:
QMV75126
UniProt:
A0A7G5EMA1
LinkDB
All DBs
Position
complement(4643560..4645368)
Genome browser
AA seq
602 aa
AA seq
DB search
MAMRSQYCGQVTEAQMGETVSLCGWVNRRRDHGGVIFIDLRDREGYVQVVCDPDRAEMFK
VAEGVRNEFCVQVKGLVRARPDGTTNESIKSGKIEVLCHELIVLNASVTPPFQIDDENLS
ETVRLTNRVLDLRRPVMQRNMMLRYKTAIQVRNFLDKEGFVDIETPMLGKSTPEGARDYL
VPSRVHDGEFFALPQSPQLYKQMLMVAGYDRYYQITKCFRDEDLRADRQPEFTQIDCETS
FLNEEEIRAIFQRMIKEVFQTQLNVDLGEFPIMTYQDAAFRFGSDKPDLRVKLEFTELTE
VMKDVDFKVFSGAANMKGGRVVGLRVPGGAREQGGLSRGDIDAYTDFVKIYGAKGLAYIK
VNELAKGRDGLQSPIVKNIHDAAIAEILKRTEAQDGDLIFFGADKDKIVNDAIGALRIKI
GHSAFGKSTGLFEDRWAPLWVVDFPMFEHDEENDRWAAVHHPFTSPKDGHEDLMDTDPGK
CIAKAYDMVLNGWELGGGSVRIHRADVQSKVFTALKISAEDARAKFGYLLDALQYGAPPH
GGLAFGLDRLITLMTGSESIRDVIAFPKTQRAQDLLTQAPSPVDEKQLRELHIKLRNTAA
AQ
NT seq
1809 nt
NT seq
+upstream
nt +downstream
nt
atggcaatgcgttcccaatactgcggtcaagtgaccgaagcccagatgggcgaaaccgtg
agcctgtgcggctgggtcaatcgccgccgtgaccacggtggtgtgattttcatcgacctg
cgcgaccgcgaaggctatgtgcaagtggtctgcgatccggaccgcgccgagatgttcaag
gtggccgaaggcgtgcgcaatgagttctgcgtgcaggtcaagggtttggtgcgtgcccgt
cctgatggcaccaccaacgaatcgatcaagagcggcaagatcgaagtgctgtgccatgag
ctgatcgtgctgaacgcctcggtgacgcctcctttccagatcgacgacgagaacctgtcg
gagaccgtgcgcctgaccaaccgcgtgctggacctgcgccgcccggtcatgcagcgcaac
atgatgctgcgctacaagacggccatccaggtgcgcaacttcctcgacaaggaaggtttt
gtcgatatcgaaacgccgatgttgggcaagagcacgcctgaaggcgcacgtgattacctg
gtgcccagccgcgtgcatgatggcgaattcttcgcgctgccccagtcgccccagctgtac
aagcagatgctgatggtggccggctatgaccgctactaccagatcaccaagtgcttccgc
gacgaagacctgcgcgctgaccgccagcccgaattcacgcagatcgactgcgaaacctcg
ttcctgaacgaggaagagatccgtgccatcttccagcgcatgatcaaggaagtgttccag
acccagctgaacgtggacctgggcgagttcccgatcatgacctaccaggatgcggccttc
cgctttggttcggacaagccggacctgcgcgtgaagctggagttcaccgagctgaccgaa
gtgatgaaggatgtggacttcaaggtcttctcgggcgctgccaacatgaagggcggccgc
gtcgtgggcctgcgcgtacctggcggtgcacgcgagcagggcggactgtcgcgcggcgac
atcgatgcctacaccgacttcgtcaagatctatggcgccaagggcctggcctacatcaag
gtcaatgagctggccaagggccgtgacggcctgcagtcgcccatcgtcaagaacatccat
gacgctgcgattgccgagatcctcaagcgcaccgaagcgcaagacggcgacttgatcttc
tttggcgccgacaaggacaagatcgtcaacgacgccatcggcgccttgcgcatcaagatt
ggccacagcgcctttggtaagagcaccggtctgtttgaagaccgctgggctccgctgtgg
gtggtggacttcccgatgttcgaacacgacgaagaaaacgaccgctgggccgctgtgcac
catcccttcacgtcgcccaaggatggccatgaggacctgatggacacggaccccggcaag
tgcattgccaaggcctacgacatggtgctgaacggctgggagctgggtggcggctcggtg
cgtatccaccgcgccgatgtgcagtccaaggtgttcactgcgctgaagatcagcgctgaa
gatgcccgtgccaagttcggctacctgctggacgcgctgcagtacggcgcgcctccccac
ggtggcctggccttcggtttggaccgcttgatcaccttgatgaccggctccgagtcgatc
cgcgacgtgatcgccttccccaagacccagcgcgcacaggacttgctgacccaggctcca
tcgccggtggacgaaaagcagctgcgcgaactgcacatcaagctgcgcaacaccgcagca
gcgcagtaa
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