Comamonas piscis: HS961_22520
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Entry
HS961_22520 CDS
T11249
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
cpis Comamonas piscis
Pathway
cpis00521
Streptomycin biosynthesis
cpis00523
Polyketide sugar unit biosynthesis
cpis00541
Biosynthesis of various nucleotide sugars
cpis01100
Metabolic pathways
cpis01110
Biosynthesis of secondary metabolites
cpis01250
Biosynthesis of nucleotide sugars
Module
cpis_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
cpis00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
HS961_22520 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
HS961_22520 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
HS961_22520 (rfbC)
Enzymes [BR:
cpis01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
HS961_22520 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
QMV75383
UniProt:
A0A7G5EN08
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All DBs
Position
complement(4990197..4990745)
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AA seq
182 aa
AA seq
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MQVIDTALPEVKIIEPKVFGDTRGFFYESFNQQAFDAAVGRHYDFVQDNHSKSSRGVLRG
LHYQVEQAQGKLVRVVQGRVLDVAVDIRKSSATFGQWVAVELSDENQRQLWVPPGFAHGF
VVFSETAEFLYKTTDYYAPAHERCIIWNDAQLSIDWQLNGLEPQLSGKDQQGKAFAEADV
FA
NT seq
549 nt
NT seq
+upstream
nt +downstream
nt
atgcaagtcatcgatacggcgctgcccgaggtcaagatcatcgagcccaaggtgtttggc
gacacgcgcggctttttctacgagagcttcaaccagcaggcttttgatgcggcggtgggc
cggcactatgactttgtgcaggacaaccacagcaagagcagccggggtgtgctgcgcggc
ctgcattaccaggtagagcaggcccaaggcaagctggtgcgggtggtgcaggggcgggtg
ctggatgtcgccgtcgatatccgcaaaagctcggccacatttggccaatgggtggcggtg
gagctgagtgatgaaaaccaacgccagttgtgggttccgcccggttttgcccatggcttt
gtggtgttcagtgaaacggctgagtttctttataaaacaacagattactatgcgcccgcc
cacgagcgctgcattatctggaatgatgcacagttgtcgattgattggcagttgaatggc
ctggagccgcagctgtcgggcaaggaccagcaaggcaaggcctttgccgaggccgatgtt
tttgcctga
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