Comamonas piscis: HS961_22785
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Entry
HS961_22785 CDS
T11249
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
cpis Comamonas piscis
Pathway
cpis03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cpis00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
HS961_22785 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cpis03021
]
HS961_22785 (rpoA)
03400 DNA repair and recombination proteins [BR:
cpis03400
]
HS961_22785 (rpoA)
Enzymes [BR:
cpis01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
HS961_22785 (rpoA)
Transcription machinery [BR:
cpis03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
HS961_22785 (rpoA)
DNA repair and recombination proteins [BR:
cpis03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
HS961_22785 (rpoA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
RNA_pol_L_2
HHH_XRCC3_RpoA
Motif
Other DBs
NCBI-ProteinID:
QMV75427
UniProt:
A0A7G5EN52
LinkDB
All DBs
Position
complement(5046069..5047064)
Genome browser
AA seq
331 aa
AA seq
DB search
MQTNLLKPKTINVEQLGHNRAKVELEPFERGYGHTLGNALRRVLLSSMVGYSATEVTIAG
VLHEYSSIDGVQEDVVNILLNLKGVVFKLHNRDEVTLSLRKDGEGVVTAADIQTPHDVEI
INPDHVIANLSQGGKLDMQIKVEKGRGYVPGNVRRYGDESTKSIGRIVLDASFSPIKRVS
YTVESARVEQRTDLDKLVLEIETNGAIAAEDAVRSSAKILVEQLAVFAQLEGGALDVFDQ
PGGQARNNATFDPILLRPVDELELTVRSANCLKAENIYYIGDLIQRTENELLKTPNLGRK
SLNEIKEVLASRGLTLGMKLENWPPAGLEKR
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atgcagaccaatttgctgaaacccaagacaattaacgtagaacagctgggccacaatcgc
gccaaggtagagctggagccgtttgaacgcggctacgggcacacgctgggcaatgcgctg
cgtcgtgttctgctgtcctcgatggtgggttattcagcgacggaagtgaccattgcaggt
gtgctgcacgagtactcatcgattgatggcgtgcaggaagatgtcgttaacatcttgctg
aacctcaagggcgtggtgttcaagctccacaaccgtgatgaagtgacgctgagcctgcgc
aaggatggcgaaggcgtagtgactgctgctgacattcagacgcctcacgatgtagaaatc
atcaaccctgatcatgtcatcgccaacctgtcgcaaggcggcaagctggacatgcagatc
aaggtggaaaaaggccgtggctatgtgcccggtaacgtgcgccgctacggtgacgagtcg
accaagtcgatcggccgcattgtgctggacgcatcgttctcgccgatcaagcgcgtgagc
tacacggtcgaatccgcccgtgtggagcagcgtaccgatctggacaagctggtcctcgag
atcgaaaccaacggcgccatcgctgcagaagatgcagtgcgctcgtcggccaagatcctg
gtggaacaacttgccgtgtttgcgcagctcgaaggcggcgcattggatgtgttcgaccag
ccaggtggccaggcgcgtaacaacgccacgttcgatccgatcctgctgcgtcctgtggac
gagctggaactgaccgtgcgttctgccaactgcttgaaggccgaaaacatctactacatc
ggtgacctgatccagcgcaccgaaaatgagttgctcaagaccccgaatctgggtcgtaag
tcgctcaacgagatcaaggaagttctggcttcccgtggtctgaccctgggtatgaagctt
gaaaactggccaccagccggtttggaaaagcgttaa
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