Chlamydia pneumoniae J138: rho
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Entry
rho CDS
T00032
Symbol
rho
Name
(GenBank) transcription termination factor
KO
K03628
transcription termination factor Rho
Organism
cpj
Chlamydia pneumoniae J138
Pathway
cpj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cpj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
rho (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cpj03021
]
rho (rho)
03019 Messenger RNA biogenesis [BR:
cpj03019
]
rho (rho)
Transcription machinery [BR:
cpj03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
rho (rho)
Messenger RNA biogenesis [BR:
cpj03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
rho (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
AAA_25
S1CSD-TOTE-2
AAA_22
OB_RNB
AAA
DUF5855
Mor
NACHT
Motif
Other DBs
NCBI-ProteinID:
BAA98817
LinkDB
All DBs
Position
complement(699347..700741)
Genome browser
AA seq
464 aa
AA seq
DB search
MKEERSSEILPRVKETKKHAYVSMQEKSCVGECAVVASESEEAESVTVTKIAKLQRMGIE
ELNILARQYGVKNIGSLTKSQVVFEIVKAKSERPDELLIGEGVLEVLPDGFGFLRSPTYN
YLPSAEDIYVSPAQIRRFDLKKGDTIIGTIRSPKEKEKYFALLKVDKINGSTPDKAKERV
LFENLTPLYPNQRIVMEMGKDHLAERVLDLTAPIGKGQRGLIVAPPRSGKTVILQSIAHA
IAVNNPDIVLIVLLIDERPEEVTDMIRQVRGEVVASTFDEQPERHIQVAEMVIEKARRLV
EHGNDVVILLDSITRLARAYNTVQPHSGKILTGGVDASALHKPKRFFGAARNIEGGGSLT
ILATALIDTGSRMDEVIFEEFKGTGNMELVLDRRLSDRRTYPAIDLIKSGTRKEELLYHP
SELERVYLFRQAIADLTTIDAMHLLLGRLKKTNSNAEFLLSLKE
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaagagcgttcttcagaaatcttgcctagggtgaaggaaacgaaaaaacatgct
tacgtttctatgcaggaaaaatcttgtgtaggggagtgtgctgtagttgccagtgagtct
gaagaggccgagtctgtcacagttacaaaaattgctaaactgcaaagaatgggaattgaa
gagctgaatatattagctcgccaatacggtgtgaaaaatataggatctctaacaaagtct
caggtcgtctttgagattgttaaagccaagtcagagcgcccagatgaattgctgataggt
gaaggcgtgttagaagtccttccagacggatttggatttctgagatccccaacctataat
tacctaccttctgctgaagatatttatgtttctccagctcagattcgtagatttgatctc
aaaaaaggtgatacgattatcggtacgatacgctcacctaaagagaaagaaaagtacttt
gctctattgaaagtagataagatcaacggatctactccagataaagctaaagaacgtgta
ctttttgaaaacctgacccccctctaccctaatcaaagaatcgtgatggaaatggggaaa
gatcatttggctgagagagtcttagatcttaccgcccccattggaaaaggacagcgggga
ttgattgtagccccaccaagatctgggaaaactgtcattctccaaagcatagcacacgcg
attgctgtgaataatcctgatattgttcttattgtcttgttaattgacgaaagacccgaa
gaagttaccgatatgattcggcaagttcgtggagaagttgttgcctcgacatttgacgaa
caaccagaaaggcatattcaggtcgctgagatggttatagagaaagctcgtcgtttagtg
gaacatggaaatgatgtggtcattctactcgattccataacacgattagcacgtgcctat
aatacagttcagccgcattctggaaaaattcttaccgggggtgtcgatgctagtgcattg
cacaaacctaagcgtttcttcggtgctgcaagaaatattgaaggcgggggatcgctcaca
attcttgcaaccgctttaattgatactggttccagaatggacgaagtgatttttgaagaa
ttcaaaggcactggaaatatggaactcgtcttggatcgacgtctgtcagatcgaagaacc
taccccgctattgatttaattaagagtggaactagaaaagaagaactcctctatcatcct
agtgaattagaaagggtctaccttttccgtcaggccatagcagatcttactactatagac
gccatgcatctcttgctaggaaggttgaagaaaaccaatagtaacgcagaattcttgttg
tcactcaaagaatag
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