Chlamydia pneumoniae J138: rpoC Help Entry rpoC              CDS       T00032                                  Symbol rpoC Name (GenBank) RNA polymerase beta'   KO K03046   DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] Organism cpj  Chlamydia pneumoniae J138 Pathway cpj03020   RNA polymerase Brite KEGG Orthology (KO) [BR:cpj00001]  09120 Genetic Information Processing   09121 Transcription    03020 RNA polymerase     rpoC (rpoC)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:cpj03021]     rpoC (rpoC)    03400 DNA repair and recombination proteins [BR:cpj03400]     rpoC (rpoC) Enzymes [BR:cpj01000]  2. Transferases   2.7  Transferring phosphorus-containing groups    2.7.7  Nucleotidyltransferases     2.7.7.6  DNA-directed RNA polymerase      rpoC (rpoC) Transcription machinery [BR:cpj03021]  Prokaryotic type   Bacterial type    RNA polymerase     Core subunits      rpoC (rpoC) DNA repair and recombination proteins [BR:cpj03400]  Prokaryotic type   SSBR (single strand breaks repair)    NER (nucleotide excision repair)     TCR (transcription coupled repair) factors      DNA-directed RNA polymerase complex (RNAP)       rpoC (rpoC) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  RNA_pol_Rpb1_1 RNA_pol_Rpb1_5 RNA_pol_Rpb1_2 RNA_pol_Rpb1_3 RNA_pol_Rpb1_4 RPOC_hybrid Mei5 Motif Other DBs NCBI-ProteinID:  BAA98292 UniProt:  Q9Z999 LinkDB All DBs Position 97713..101894 Genome browser AA seq 1393 aa AA seqDB search MFGENSRDIGVLSKEGLFDKLEIGIASDITIRDKWSCGEIKKPETINYRTFKPEKGGLFC EKIFGPTKDWECCCGKYKKIKHKGIVCDRCGVEVTLSKVRRERMAHIELAVPIVHIWFFK TTPSRIGNVLGMTASDLERVIYYEEYVVIDPGKTDLTKKQLLNDAQYREVVEKWGKDAFV AKMGGEAIYDLLKSEDLQSLLKDLKERLRKTKSQQARMKLAKRLKIIEGFVSSSNHPEWM VLKNIPVVPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLKAILRLKTPEVIVRNEKR MLQEAVDALFDNGRHGHPVMGAGNRPLKSLSEMLKGKNGRFRQNLLGKRVDYSGRSVIIV GPELKFNQCGLPKEMALELFEPFIIKRLKDQGSVYTIRSAKKMIQRGAPEVWDVLEEIIK GHPVLLNRAPTLHRLGIQAFEPVLIEGKAIRIHPLVCAAFNADFDGDQMAVHVPLSVEAQ LEAKVLMMAPDNIFLPSSGKPVAIPSKDMTLGLYYLMADPTYFPEEHGGKTKIFKDEIEV LRALNNGGFIDDVFGDRRDETGRGIHIHEKIKVRIDGQIIETTPGRVLFNRIVPKELGFQ NYSMPSKRISELILQCYKKVGLEATVRFLDDLKDLGFIQATKAAISMGLKDVRIPDIKSH ILKDAYDKVAIVKKQYDDGIITEGERHSKTISIWTEVSEQLSDALYVEISKQTRSKHNPL FLMIDSGARGNKSQLKQLGALRGLMAKPNGAIIESPITSNFREGLTVLEYSISSHGARKG LADTALKTADSGYLTRRLVDVAQDVIITEKDCGTLNHIEISAIGQGSEELLPLKDRIYGR TVAEDVYQPGDKSRLLAQSGDVLNSVQAEAIDDAGIETIKIRSTLTCESPRGVCAKCYGL NLANGRLIGMGEAVGIIAAQSIGEPGTQLTMRTFHLGGIAATSSTPEIITNSDGILVYMD LRVVLGQEGHNLVLNKKGALHVVGDEGRTLNEYKKLLSTKSIESLEVFPVELGVKILVAD GTPVSQGQRIAEVELHNIPIICDKPGFIKYEDLVEGISTEKVVNKNTGLVELIVKQHRGE LHPQIAIYDDADLSELVGTYAIPSGAIISVEEGQRVDPGMLLARLPRGAIKTKDITGGLP RVAELVEARKPEDAADIAKIDGVVDFKGIQKNKRILVVCDEMTGMEEEHLIPLTKHLIVQ RGDSVIKGQQLTDGLVVPHEILEICGVRELQKYLVNEVQEVYRLQGVDINDKHIEIIVRQ MLQKVRITDPGDTTLLFGEDVNKKEFYEENRRTEEDGGKPAQAVPVLLGITKASLGTESF ISAASFQDTTRVLTDAACCSKTDYLLGFKENVIMGHMIPGGTGFETHKRIKQYLEKEQED LVFDFVSETECVC NT seq 4182 nt NT seq  +upstreamnt  +downstreamnt atgttcggagaaaattctcgagacattggagttctttctaaagaaggactatttgataaa ttagagataggcatagcttcagatattacaattcgtgataaatggtcttgtggagaaatc aaaaagccagaaactataaattaccgtacgtttaaacctgaaaagggcggtctattttgt gaaaaaatctttggtcctactaaagattgggaatgttgctgcggaaaatataaaaaaata aaacataaaggaattgtctgcgatcgatgcggagttgaagttactctttcaaaagtccgt cgtgaacgtatggctcatatcgagttagcagttcctattgtccatatttggtttttcaaa acaactccatcacgcattggtaatgttcttggaatgacagcttcggatctggaacgtgtc atttattatgaagaatatgtagttattgacccaggtaagacagacctaactaaaaaacaa cttcttaatgatgcgcaatatcgtgaagttgttgagaagtggggtaaggacgctttcgtt gctaaaatgggtggcgaagctatctatgatttgcttaaatccgaagatctccaaagcttg cttaaagatcttaaagagcgtttacgcaaaacaaaatctcagcaagcgagaatgaagtta gccaaacgtcttaaaatcattgagggatttgtttcttcatccaaccacccggagtggatg gtattaaaaaatatcccagtagttccacctgatctccgtcctcttgttcctttagatggc ggtcgttttgcgacttctgatttaaacgatctctaccgccgtgtaattaatcgtaacaat cgtcttaaagcgatcttacgtttaaaaacaccagaggttattgttcgtaatgaaaagcgt atgcttcaagaagctgttgatgctctttttgataacggtcgacatggtcatccggtcatg ggagctggaaaccgaccattgaaatccttgtcagaaatgttaaagggaaaaaatggacgc ttccgtcaaaatcttttaggaaaacgtgttgactactctggacgttctgtaattattgtt ggtcctgaattgaagtttaatcaatgcggattgcctaaggaaatggctttagagctattc gaaccctttattattaaaagactaaaagatcaaggcagcgtttataccattcgttctgct aagaaaatgattcaacgaggagccccagaagtttgggacgttctcgaagagatcattaag ggacatccagtacttcttaaccgagcacctacattgcaccgtttaggaattcaagctttc gaacctgtattgatagaaggtaaagcgattcgtatacaccccctagtttgcgcagcgttt aacgctgacttcgacggagaccaaatggccgtgcacgttcctctatctgtagaggcacaa ctggaagctaaagttttaatgatggctccagacaacatcttccttccttcctcaggaaag cctgtggctattccttcgaaagatatgactttaggattatattatctgatggcagatcct acctattttcctgaagaacatggaggaaaaactaagatatttaaagatgaaatcgaagta ttgcgtgctttaaataacggtggattcattgatgatgttttcggagatcgtcgtgatgaa acaggacgcggtatccatattcatgaaaagattaaagtgcgtattgatggacaaattatt gagacaaccccaggaagggtattgttcaacagaattgttcctaaagaactcggcttccaa aattacagcatgccaagtaagcgtataagtgagcttattttacagtgctataagaaagtc ggtttagaagctactgtacgtttcttagatgaccttaaagatcttggatttattcaagct acaaaagccgcaatctctatgggattgaaggatgttcgtattcctgatatcaagagtcat atcctcaaagatgcctacgataaggttgctatcgtcaaaaaacaatatgatgatgggatc attactgaaggggagcgtcattccaaaactattagtatttggactgaagtttccgaacag ctttcagatgccctctatgttgaaattagcaaacaaacacgtagcaagcataaccccttg ttcctgatgattgattctggagcccgaggtaataaatcccagttgaaacagttgggagcg ttacgaggattaatggcgaagccaaacggagcaattattgaatctccaattacttcgaac tttagagaaggattgacagttttagagtactccatctcctcacacggtgcgagaaaaggt ttagccgatacagctctaaaaactgccgactccggatacttaacacgtagacttgtagac gtagcccaagacgtgatcattaccgaaaaagattgcggtacgttaaatcacattgagatt tctgcaataggtcaaggttctgaagaactcttgcctcttaaagatcgtatctatggacgt actgtagctgaagatgtctatcaaccaggtgataaaagtcgactacttgctcaatcgggt gatgtactcaactccgtacaagcagaagcaattgatgatgccggtattgagacaattaag attcgttctacattaacgtgcgaaagtcctcgcggagtttgtgcaaagtgttacggcctc aatttagctaatggtagactcattggcatgggtgaagctgttggtattattgctgctcag tcgattggggaacctggaactcagttaacaatgagaacgttccacctagggggtattgct gctacgtcttcaactcctgagattattacgaatagtgatggtatcttagtctacatggat ctccgtgttgttctggggcaagaaggtcacaatcttgtcttgaataagaagggagcttta catgttgtaggtgatgaaggtcgtactctcaatgagtataaaaagctgctttcaaccaag tctatagaaagcctagaggtatttcctgtagaactaggagtgaaaattcttgttgctgac ggaactcctgtttctcaaggacaaagaatcgcagaagttgaactacacaatattcctatc atttgcgataagcctggctttattaaatatgaagatttggttgagggaatctctacagag aaagttgtgaacaagaacacaggacttgttgaacttattgtgaaacagcaccgaggggag ttacatcctcagattgctatctatgatgatgctgacttgtcagaacttgtcggaacctat gcgattccttcaggagcgattatctctgtagaagaaggacaacgggttgatccaggtatg ttgttagctagacttcctcgcggagctatcaaaacaaaagatattactggcggtttgcct cgtgttgctgaattagtagaagctcgtaaacctgaagatgctgctgacatcgccaaaatt gatggtgttgttgacttcaaaggaattcaaaagaacaaacgtattcttgttgtctgtgat gaaatgacaggtatggaagaagaacatctgattccattaaccaaacatttgattgtacaa cgtggagatagtgtgattaaagggcagcagcttaccgatggtttagttgttcctcatgaa atcctagaaatttgcggagttcgtgaacttcagaagtacctggtaaatgaggtgcaggaa gtttaccgtctgcagggcgttgacattaacgataagcatattgaaattattgttcgtcag atgttacaaaaagtacgaattactgacccaggtgatacgactctgctctttggcgaagac gtgaataagaaagagttttatgaagaaaatcgtcgtaccgaagaagacggtggtaagcca gctcaagctgttcccgtcttattgggaattacgaaagcttctttgggtacggaatcgttt atatcagcagcttctttccaagacacaactcgagtcttaacagatgcagcttgttgtagc aaaaccgactaccttcttggatttaaggaaaatgtgatcatgggtcatatgattcctggt ggtacaggctttgaaacgcataagcgtattaagcagtatctagaaaaagaacaagaagat ctcgtttttgattttgttagtgaaacagagtgtgtttgttaa

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