Chlamydia pneumoniae J138: rpoN Help Entry rpoN              CDS       T00032                                  Symbol rpoN Name (GenBank) RNA polymerase sigma-54   KO K03092   RNA polymerase sigma-54 factor Organism cpj  Chlamydia pneumoniae J138 Pathway cpj02020   Two-component system cpj02040   Flagellar assembly Brite KEGG Orthology (KO) [BR:cpj00001]  09130 Environmental Information Processing   09132 Signal transduction    02020 Two-component system     rpoN (rpoN)  09140 Cellular Processes   09142 Cell motility    02040 Flagellar assembly     rpoN (rpoN)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:cpj03021]     rpoN (rpoN) Transcription machinery [BR:cpj03021]  Prokaryotic type   Bacterial type    RNA polymerase     Sigma factors      rpoN (rpoN) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Sigma54_DBD Sigma54_CBD Sigma54_AID At5g52880_ARM Motif Other DBs NCBI-ProteinID:  BAA98979 LinkDB All DBs Position complement(868462..869784) Genome browser AA seq 440 aa AA seqDB search MFQQKQKLSLKYLPSLRMQQGLQMLQSPLTELSSYVVQEIIDNPFFDLSSLEEEEWSPCY RPTNSTFSYLNQTPGPQESLYTRLLPQIEEAFSTAEERFIAHQIAGNLSDEGLFLRNPED FAQELELPLEKIHKVWDTIQNLSPEGIASPSLQSYWMKLLRNSSHQQAYSIVRDCYPLMT NCEFAPIMKKFSLSLSELRNILKKALGSIPWCPAAACTVKPMVSTPLPDIYLFYSSGSWK IEVSTRGLPSIKLNKETFHFYEHLPKEEQKNLSQQILSAKWLIKNLRKREQTLLQVMETL LPKQEDFLLGKIPAPYPLGIKDLAEDLSFHESTIFRAIENKAVAAPIGIFPLKHLFPRGI HQDSSHSKENVLQWIRQWIATEQTPLSDSVISDRITAKGIPCARRTVAKYRAQLKILPAN KRKKLFYIRSSNSHFRDRQF NT seq 1323 nt NT seq  +upstreamnt  +downstreamnt atgtttcagcaaaagcagaagttgtctctaaagtatctaccctcactaaggatgcaacaa ggcctgcagatgctgcaatcgccacttactgagttatcatcgtatgtagttcaagagatc attgataatcctttttttgatctctcttcactagaagaggaagaatggtctccttgttat cgacctacaaactctacgttttcctatttgaatcagactcctggacctcaagagtcttta tatactcgtctccttcctcaaatcgaggaggctttttctactgcagaagaacgattcatt gcccatcaaattgccgggaatctctcggatgaaggactctttctaagaaatcctgaggat tttgctcaagaacttgagcttcccttagaaaaaattcataaagtttgggacactatacaa aacctaagtcctgaaggcattgcctctccttcgctacaaagctattggatgaagctcctc cgcaactcctcccaccaacaagcctatagcatcgtccgtgattgctatcccttgatgact aactgtgagtttgcgcctattatgaaaaagttcagtctctctttatccgaacttcgaaat attttaaaaaaagcattaggatctataccttggtgtcctgcagcagcttgcactgtgaag cccatggtatcaactcctcttcccgatatttatcttttttattcctcaggatcttggaaa attgaagtgagtactcgaggcttgccatctataaagctgaataaagaaacgtttcacttc tatgaacaccttcctaaagaagagcagaaaaacctctctcaacaaattttatcagcaaag tggctaatcaaaaatctcagaaaacgagaacaaacgctccttcaagtgatggagacactt ctccccaaacaagaagactttttattaggaaaaattccagccccctatcctttaggcatt aaagatttggctgaagatctctcttttcatgagtcaacaatcttccgtgccattgaaaac aaagcggttgcagctcctatagggattttccctctaaagcacctcttcccccgaggaatc catcaagattcctcgcattctaaagagaatgttctacaatggatccgccaatggatcgca acggaacaaactcctctatctgatagtgtgatcagtgacagaatcactgcaaaagggatt ccttgtgcccgacgtacagtagcaaaataccgtgcacaactaaagatcctgcctgctaat aaaagaaaaaagctgttttacataagatcatcaaacagtcattttagagataggcagttc tag

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