Chlamydia pneumoniae J138: uvrD
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Entry
uvrD CDS
T00032
Symbol
uvrD
Name
(GenBank) DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
cpj
Chlamydia pneumoniae J138
Pathway
cpj03420
Nucleotide excision repair
cpj03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cpj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
uvrD (uvrD)
03430 Mismatch repair
uvrD (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cpj03400
]
uvrD (uvrD)
Enzymes [BR:
cpj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
uvrD (uvrD)
DNA repair and recombination proteins [BR:
cpj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
uvrD (uvrD)
MMR (mismatch excision repair)
Other MMR factors
uvrD (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
AAA_30
Viral_helicase1
UvrD_C_2
AAA_11
Motif
Other DBs
NCBI-ProteinID:
BAA98980
LinkDB
All DBs
Position
complement(869787..871706)
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AA seq
639 aa
AA seq
DB search
MTCISELNEAQRKAVTAPLNPVLVLAGAGAGKTRVVTYRILHLINQGIAPREILAVTFTN
KAARELKERIVNQCASTNEFDVPMVCTFHSLGVFILRRSINLLNRENNFTIYDQSDAEKL
IKHALQQHNLKPNLASKIQAHVSQAKNRLLFPEDLDPNDYIDPVVSIYQEYQKKLIEANA
LDFDDLLFLTVRLLRESPEAQELYNQLWKALLIDEYQDTNHAQYTLMQLLSKQHRNVFAV
GDPDQSIYSWRGANIHNILNFENDYPNAKVLCLEENYRSYGNILNAANALIKNNASRLEK
ELRSVKGPGEKIRLFLGSTDREEADFVAAEILQLHRVGNIKLRDICIFYRTNSQSRTFED
ALLRRRIPYEIIGGLSFYKRKEIQDILAFLRIFISKSDIVAFDRTVNLPKRGIGSTTIFA
LTQYAIAQGLPILKACQQALDTKDVKLSKKQQEGLQEYLALFPQIEHAYNTLSLRDFIES
VVRITGYLEILKEDADTFKDRKSNLEELYHKALESEQQNPKTHLELFLDDLALKGSDDDL
NLTADRVNLMTLHNGKGLEFRVSFLVGLEEQLLPHANSLGGTYENIEEERRLCYVGITRA
QDLLYLTAAQVRSLWGTVRMMKPSRFLKEIPKDYMIQVR
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
atgacatgtatctcagaacttaacgaagcacaacgcaaagctgtaacagctcctctcaat
cctgtactcgttctagcaggagcaggagcaggtaaaactcgtgtggttacctatagaatc
ttacacctaattaaccaaggcatcgcgcctcgagaaattctggctgtaacttttacgaat
aaagcagcgcgagaacttaaagaacgtattgtcaatcagtgtgcttccactaatgaattt
gatgttccgatggtgtgtacatttcatagtttaggagtttttattctccgacgttctata
aatctgctaaatcgtgaaaataattttactatttatgatcaaagtgacgcggaaaagctc
atcaagcatgccttgcaacaacacaacctcaaacctaatcttgcgagcaaaatacaagct
cacgtctcacaagcaaagaaccgtttactctttcccgaagacttggatcccaatgactat
atcgatcctgtagtctcgatataccaagaataccaaaagaaacttatcgaagcgaatgct
ctggatttcgatgatcttctctttttaaccgtaagacttcttagagaaagtcccgaagca
caggaattatataaccaattatggaaagcattgctcatcgatgagtatcaagataccaac
catgcacaatatactttaatgcagctcctctcaaagcaacatcgcaatgtctttgctgtt
ggggatcctgatcagtctatctactcctggcgaggagcaaatattcacaatatcttaaat
tttgaaaacgattaccctaatgctaaagtcttatgcctcgaagaaaactaccgcagttat
ggcaatattctaaatgccgctaatgctctgattaaaaataacgcatcaaggttagaaaaa
gaattgcgtagcgtcaaaggacctggagaaaagattcgtcttttcctaggaagcacagat
cgcgaagaagcagactttgtcgctgcagaaattcttcaattacatagagtcgggaatata
aaactacgtgacatctgtattttctatagaacgaactcccaatctcggacatttgaagac
gctctacttcgcaggcgcattccctatgaaattatcgggggtctctccttctacaagcgt
aaggaaatccaagatatcctagcctttctccgtatctttatttccaaaagcgacatcgtt
gcttttgatagaactgtaaatctacccaaacgagggatcggttcaacaacgatatttgca
ctcacgcaatatgcaattgctcaaggtctccctatcctcaaagcatgccaacaagccttg
gatactaaagacgtcaaattatctaaaaaacaacaagaaggccttcaagagtatcttgca
cttttccctcaaattgaacatgcctacaatactctttcccttagagattttatagagtct
gtagttaggatcacgggttaccttgagatcttaaaagaagatgcggataccttcaaagat
cggaaaagcaatttagaggaactctatcataaagctttggaatccgaacaacaaaatcca
aagacacatttggaacttttccttgatgatcttgccttaaaaggctctgatgatgatcta
aatttaactgcggatcgcgtgaatttgatgacccttcataatggaaaagggttggagttc
cgtgtatcatttcttgtaggtctagaagaacaattgcttccacatgcgaactctctgggc
ggcacttatgaaaatattgaagaagaacgacggttatgctacgtaggaattactcgagct
caagatctcctctatcttactgccgcacaagttcgcagcctctggggaaccgtacggatg
atgaagcccagtagatttttaaaggaaattccaaaagattatatgattcaagtgcgttag
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