Corynebacterium pseudotuberculosis 1002: CP1002_00030
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Entry
CP1002_00030 CDS
T01876
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
cpk
Corynebacterium pseudotuberculosis 1002
Brite
KEGG Orthology (KO) [BR:
cpk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cpk03032
]
CP1002_00030 (gyrB)
03400 DNA repair and recombination proteins [BR:
cpk03400
]
CP1002_00030 (gyrB)
Enzymes [BR:
cpk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
CP1002_00030 (gyrB)
DNA replication proteins [BR:
cpk03032
]
Prokaryotic type
DNA Topoisomerases
CP1002_00030 (gyrB)
DNA repair and recombination proteins [BR:
cpk03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
CP1002_00030 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
HATPase_c
Toprim
SPDY
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
ADL19914
LinkDB
All DBs
Position
5567..7612
Genome browser
AA seq
681 aa
AA seq
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MATAEHEYGASSITILEGLEAVRKRPGMYIGSTGERGLHHLVWEVVDNSVDEAMAGHATH
VDVTLLEDGGVEVVDNGRGIPVDMHASGAPTVQVVMTQLHAGGKFDSDSYAVSGGLHGVG
ISVVNALSTRVEADIKLHGKHWYQNFSNAVPDELVQGGNARGTGTTIRFWPDAEIFETTT
FKFDIIARRLQEMAFLNKGLTLSLTDKRVSDEELELEAIADEGDTAENVSLEKIDSDADG
NIEAPAAPKKREKKKVFYYPEGLKDYVAHLNKSKQVIHPTIVAFEAKGDDHEVEVAMQWN
NGYAQSVHTFANTINTIEGGTHEEGFRAALTTLMNRYAREHRLLKEKESNLTGDDCREGL
SAVISVRVGDPQFEGQTKTKLGNTEVKGFVQRMVNEHVADWLDANPAEAKTIINKAVSSA
HARMAARKARDLVRRKSATDLGGLPGKLADCRSKDPVKSELYVVEGDSAGGSAKAGRDSL
YQAILPLRGKILNVEKARLDKVLKNAEVQAIITALGTGIHDEFDINKLRYHKIVLMADAD
VDGSHIATLLLTLLFRFMPQLIEEGHVYLAQPPLYKLKWGKGDPGFAYSDAERDSLLEEG
LAQGRKINKDDGIQRYKGLGEMNASELWETTLDPEFRVLRRVDINDAQRADEIFSILMGD
DVAARRSFITRRAKDVRFLDI
NT seq
2046 nt
NT seq
+upstream
nt +downstream
nt
gtggcaaccgctgaacatgaatatggcgcctcatccattacgatccttgagggtctagag
gctgtacgtaagcgccccggtatgtacatcggctcgaccggtgaacgcggcctacaccat
ttggtgtgggaggtcgtggataactccgtagacgaggcaatggctggtcacgccacgcac
gttgacgtcactctgttggaagacggcggagtggaggtcgtggataacggccgaggcatc
cccgtcgatatgcatgcctctggtgcaccgacggttcaggtcgttatgacgcagctccat
gctggtggcaaattcgattctgattcctatgcggtttccggtggtctccacggcgtgggt
atctctgtggtcaacgctctatccactcgcgttgaggccgacattaaacttcatggcaaa
cattggtatcaaaacttctccaatgccgttccagacgagctagtccaaggtggaaatgca
cggggaacaggaaccaccattcggttctggccagatgctgagatctttgaaaccaccacc
tttaagttcgacatcatcgctcgtcgtttgcaggaaatggcgttcctgaataagggactg
accctttctctgacggataagcgcgtgagcgatgaagaacttgagctggaggcaatcgct
gatgaaggcgatactgcagagaacgtttctctagaaaaaatagactccgatgccgatggg
aacattgaagcccctgctgctccgaagaaacgggagaagaaaaaggtcttttattacccc
gagggactcaaagactatgtcgcgcatctgaataaatctaagcaggtcattcaccccact
atcgttgcctttgaagccaaaggtgatgatcacgaggttgaagtggctatgcaatggaac
aatggttatgcgcaaagcgtgcatacctttgccaacaccatcaacacgattgaaggtggc
acccatgaagaagggttccgtgccgcgcttacaacgttgatgaaccgctacgcgcgtgaa
caccgactgctcaaagaaaaagaatctaatctcactggtgacgattgccgtgaagggctt
tccgcagttatttccgtcagagtgggtgatccccaatttgaagggcagactaagacaaaa
ctcggtaatactgaggtaaaaggctttgttcagcgcatggtcaatgagcatgtagcagat
tggctggacgctaaccccgcagaagcaaagaccattatcaataaagccgtgtcttctgct
catgcgcgtatggcggcacgtaaagcccgtgatctggtgcgccgtaaatctgcaacggat
cttggtggtcttccaggtaaattggcagattgccgctccaaggacccggtgaagtctgaa
ctttatgtggtagagggcgattctgcaggtggttccgctaaagccggtcgagattcccta
taccaggctatccttccgttgcgtggaaaaatcctgaatgtggaaaaagcacggttggat
aaggtgctcaagaacgccgaggttcaggcaattattactgctttgggcacaggcatccat
gatgagtttgacatcaacaagctgcggtaccacaagattgttcttatggccgatgctgac
gttgacggatcccacattgctacgctgctgcttaccttgttgttccgattcatgccacag
cttatcgaggaaggccacgtttatctggctcaaccgccgctgtacaagctcaagtggggt
aagggcgaccccggctttgcttattcggatgccgagcgcgactcgcttttggaagaaggc
ttagcgcaggggcgcaagatcaacaaagatgatggaatccagcgttataagggtctaggc
gagatgaacgccagcgagctgtgggaaaccacgcttgaccccgagttccgcgtactgcgc
cgagtggacatcaatgatgcacagcgtgctgatgaaattttctccatcctgatgggcgat
gacgttgcagctcgtcgtagctttatcacgcgtagagcaaaagacgttcgcttccttgac
atttag
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