Corynebacterium pseudotuberculosis 1002: CP1002_04055
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Entry
CP1002_04055 CDS
T01876
Symbol
dacB
Name
(GenBank) D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase
KO
K07259
serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:
3.4.16.4
3.4.21.-]
Organism
cpk
Corynebacterium pseudotuberculosis 1002
Pathway
cpk00550
Peptidoglycan biosynthesis
cpk01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cpk00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
CP1002_04055 (dacB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cpk01002
]
CP1002_04055 (dacB)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
cpk01011
]
CP1002_04055 (dacB)
Enzymes [BR:
cpk01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
CP1002_04055 (dacB)
Peptidases and inhibitors [BR:
cpk01002
]
Serine peptidases
Family S13: D-Ala-D-Ala peptidase C family
CP1002_04055 (dacB)
Peptidoglycan biosynthesis and degradation proteins [BR:
cpk01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
CP1002_04055 (dacB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S13
Beta-lactamase2
Peptidase_S11
Motif
Other DBs
NCBI-ProteinID:
ADL21662
LinkDB
All DBs
Position
884672..885856
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AA seq
394 aa
AA seq
DB search
MKKWWMSTVVVTVAVIATVVFAVANVLVHDPVQVDKPERGITALEARNVDNTGLKATLDA
MAHDRRLGNFGAMITDITTGEVVLSQNAEVALTPASSTKLLTAAAALYELGPQDRIVTEV
RKKDRTVIIKGSGDVWMTHEQIDSLAAQIGTGVDTVLVNATAWKDKLLPGWDPADVDAGF
VAPLEPVMLYGGRLGGTSGDVPRSHRPAFDVAEALAQRLGAGTVGYTDSNDGDVVAHTES
PTLQKRISMMMEDSDNVMAEAIGRELSAEHPVEATLDVLRKNGIDVSGSTVVDNSGLSLG
NQITPKLLNQVAASSVLALPVAGGTGTLENRFNNTPGAGWVRAKTGTLTGVSALAGVVPS
KSGHVYSFAMISNGSEIRQARAALDAIANAVRES
NT seq
1185 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagtggtggatgtcaacagtggtagtaactgtcgcagttatagcgacggtggtg
ttcgctgttgcaaatgtgctagtccatgatccggtgcaagtggacaaaccggaacgcggt
atcacggctcttgaagctcgaaatgtggacaatactggcttgaaggccaccttggacgca
atggcgcacgacaggcgtttgggcaattttggagcgatgatcactgacatcaccacaggt
gaagtggtcctttctcagaacgcggaggtcgccctgactccggcctcgtcaacaaaatta
ctaacggcagcagccgcactctatgagctaggcccacaggaccggatagtcacagaagta
cggaagaaagaccggacggtaataatcaagggatctggagacgtgtggatgacgcacgag
cagattgattccttggctgcacaaattggcacgggggtagacaccgtgctggtcaatgcc
accgcttggaaagacaagcttcttcccggatgggatcccgctgacgtagatgctggtttt
gtggccccactggagccggtgatgctctatggcggacggttaggaggaacctccggcgat
gtgcctagaagccaccgcccggcctttgacgtagcagaggccctggcgcaacgcctaggc
gctggaaccgtcggttacacggattccaatgacggcgatgtggtagcccacactgagtcg
ccaacactgcaaaaacgtatctctatgatgatggaagactccgacaacgtgatggctgag
gccattgggcgagagctatctgcggaacatcccgtggaagcaacgctggatgtgctgcgg
aaaaatggcatagatgtgagcggatcaacggtggtggacaactctggattgagcctgggc
aaccagatcactccaaagctgcttaatcaggtggccgcttcttcagtgcttgcgctacca
gtggccgggggcaccggaacattagaaaatcggtttaataacacaccaggagccgggtgg
gttcgtgctaaaaccggcacgctcactggagtttctgccctggccggagttgtgccgtcg
aaaagcgggcatgtgtatagctttgccatgatttctaacggctcggagattaggcaggct
cgcgcggctctcgatgctatagcgaatgcggtgcgtgagtcctag
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