Corynebacterium pseudotuberculosis 1002: CP1002_06210
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Entry
CP1002_06210 CDS
T01876
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
cpk
Corynebacterium pseudotuberculosis 1002
Pathway
cpk03030
DNA replication
cpk03430
Mismatch repair
cpk03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cpk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CP1002_06210 (dnaE)
03430 Mismatch repair
CP1002_06210 (dnaE)
03440 Homologous recombination
CP1002_06210 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cpk03032
]
CP1002_06210 (dnaE)
03400 DNA repair and recombination proteins [BR:
cpk03400
]
CP1002_06210 (dnaE)
Enzymes [BR:
cpk01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CP1002_06210 (dnaE)
DNA replication proteins [BR:
cpk03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CP1002_06210 (dnaE)
DNA repair and recombination proteins [BR:
cpk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CP1002_06210 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
HHH_3
Motif
Other DBs
NCBI-ProteinID:
ADL21250
LinkDB
All DBs
Position
1340858..1344418
Genome browser
AA seq
1186 aa
AA seq
DB search
MAKKSSFVHLHNHTEYSMLDGMAKVDMLAEEVLRQGMPAVGMTDHGNMFGSDAFYRTMKK
AGVKPIIGIEAYMAPDSRFNKTRVRWGEPHQKSDDVSASGAYLHQTMLAENAEGLRNLFY
LSSMASYEGQLGKWPRMDADLIAEHASGIIATTGCPSGDVQTRLRLGQFDQALEAAAMWQ
DIYGKENYFLELMDHGLEIENRVRSELLEIGRKLDLPPLVTNDCHYVLESQAPAHEAMLC
VQTGKTLSDPDRFKFDGSGYYIKTAEQMREMWDSLVPEACDNTLWIAERVQDYGEIWEEH
THDRMPIADVPEGHTPTSWLRHEVLEGLRVRFNGGEVPQSYIDRAEYEISVIDMKGYPSY
FLIVAELIKHARSIGIRVGPGRGSAAGALVAYALTITNIDPMEHDLLFERFLNPERPSAP
DIDIDFDDRRRGEMIRYAADRWGEDKIAQVITFGTVKTKQAIKDSARVQYGQPGYQIADR
ITKELPPAIMAKDIPLSGIMDPEHPRYGEAGEVRNLIETDPDVKKIYDTARGLEGVVRQA
GVHACAVIMASVPLLEHIPMWKRAADGALITGWPYPACEAIGLLKMDFLGLRNLTVIGDC
IENIKINRKETVDLEELTTDDPKVYELLSSGDTLGVFQLDSGGMQELLKRMQPTGFHDIV
ASLALYRPGPMGVNAHWDYADRKNGRKPIEPIHPELDEPLREILDETYGLIVYQEQIMRI
SQKVANYTAGEADGFRKAMGKKQPEVLAKQYDKFLEGMLSNGYSKGAVDALWGTIEPFAS
YAFNKSHAAGYGLVSYWTAYLKANYTAEYMAALLTSVADKKDKSAIYLSNCRHLGISVLS
PDVNESRLNFLPVGNDIRFGLGAVRNVGEDVVNSIVKARQEKGGFSDFSDYLDKIDTVAC
NKRVTESLIKAGAFDSLGHPRKGLLLIHEDAVDSVISTKKAADKGQFDLFAGFGGDDASM
GNAFAVQIPEAQWDRKHQLALEREMLGLYVSGHPLDGYEEALDAQTDTQLTTILAGELRN
GAEVQIGGIISSVDRRYSKKDGSPWAIVTIEDHHGAQVDLLVFNKIYAIVGPQIVEDNII
LAKAHVSIRDDRMSLFCDDLKVPDLGPGNGAGLPLRLTMRTEQCTMANIARLKDVLANNK
GDSDVYLNIVHGDEATVMILGEHLRVNRTASLMGDLKATMGPGILG
NT seq
3561 nt
NT seq
+upstream
nt +downstream
nt
atggccaagaaatcctctttcgtacatctgcataatcacactgagtattcgatgctcgac
ggcatggcgaaagtggatatgcttgcagaagaagtccttaggcagggaatgccagctgtg
ggaatgacagatcacggcaatatgtttggatcggatgctttttaccggaccatgaagaaa
gccggagtaaaaccgattattggcatcgaggcttatatggccccggattcccgattcaat
aaaactagggttcggtggggtgaaccacaccagaaatctgatgatgtttcagcttccggt
gcatatttgcaccaaactatgttggcggaaaacgctgagggtctgcgtaacctcttctac
ctgtcttcgatggcgtcgtatgaaggccaactgggtaagtggccgcgaatggatgcggac
ctgatcgccgaacatgcctcagggattatcgcgaccacggggtgcccctctggggacgtc
cagacgcgcttgcggctaggccaatttgatcaggcgttggaagcggctgccatgtggcag
gatatttatggcaaagaaaattatttcttggagctcatggatcatggcctggagatcgag
aatcgggttcgctcggagttgctagagattgggcggaagcttgatctcccaccattagtt
accaatgactgccactatgttttggaatctcaagcgccggcccacgaggccatgttgtgc
gtgcagacaggaaaaactttgagcgatcctgatcgctttaagtttgacggttccggttat
tacatcaagaccgcggagcagatgcgagagatgtgggattctcttgtgccagaagcctgc
gataatactctgtggattgcggaacgagtccaggattacggtgaaatctgggaggaacac
actcacgaccgtatgcctatcgcagacgtgccggaggggcatacaccaacctcttggttg
cgtcatgaggtcttggaaggcttgcgcgttcgattcaatggcggggaagtcccgcagtct
tatatcgatcgtgctgaatacgagatctcagtgattgatatgaagggctatccttcttac
ttcctcatcgttgctgagctgattaaacatgcccgatcaattggcattagagtagggcct
ggtcgtggttctgccgcaggcgccttggtggcatatgcgttgaccattaccaatattgat
ccgatggaacatgatcttctctttgagaggttcttgaacccggagcggccttccgcacct
gatatcgatatcgactttgacgatcgtcgccgtggcgagatgattcgttacgccgcagat
cgctggggagaggacaagatcgcccaggtgatcacctttggaacggtgaaaactaagcag
gccatcaaagattcagctcgtgtgcagtatggtcagcctggttaccagatcgccgatcgt
attactaaagaacttcccccagcaattatggcgaaggacatcccgctgtccgggattatg
gaccccgagcatcctcggtatggggaagccggagaagtccgaaaccttattgagacagat
ccagatgttaaaaaaatctatgacactgctcgtggattagagggagtggtgcgccaagca
ggcgttcatgcttgcgccgtgattatggccagcgtgccgttgctggaacatatacctatg
tggaagcgcgcggcagacggcgcgttaatcaccggatggccatatcctgcctgtgaggct
attggcctgcttaagatggacttcctggggttgcgtaacctcacggttatcggcgactgc
attgaaaacatcaagatcaacaggaaagagacggttgatcttgaagagctcaccacggac
gaccctaaagtgtatgagctgctgtccagtggtgatactctcggcgttttccagctcgac
tcgggcggtatgcaagagctactcaaacgaatgcagcccacgggcttccatgacattgtg
gcgtctttggctttgtatcgtcctggccccatgggcgtgaatgcacactgggattatgcg
gatcgcaagaatggccgtaagcccattgagccgatccaccctgaactcgacgagccgctg
cgcgagattcttgatgagacctatggcctcatcgtttatcaagagcagatcatgcgtatt
tcccagaaggtagctaattacacagctggtgaagccgacgggttccgcaaggcgatgggt
aagaagcagccggaagtgctggctaagcaatatgacaaattcctagaaggaatgttgtcc
aacgggtactccaagggagccgtggatgcgttgtggggcaccatcgagccctttgcctct
tacgcgttcaacaaatctcacgccgcaggatatggtctcgtttcttactggactgcgtat
ctgaaagccaactacacagctgaatatatggcggcactgctcacatctgttgcggataaa
aaggacaagtctgccatttatctgtctaactgccgacacctgggtatatcggtgctctca
ccagacgtcaacgagtctcgtttaaacttcctccccgtaggaaacgatattcgctttggt
ttaggagccgtgcgtaacgttggcgaggacgtggttaactccattgttaaagcgcgtcag
gaaaagggcgggttctcagatttctcggattatctggataaaatcgatacggttgcttgt
aacaaacgcgtgacggagtctttgattaaagccggagcgtttgattccttgggacacccg
aggaaaggcttgttgctaatccacgaggacgcagttgattccgtgattagcactaaaaaa
gctgcagacaaagggcaatttgaccttttcgccggatttggcggtgatgatgcctcgatg
ggcaatgcttttgccgtgcaaattccagaagcccaatgggatagaaagcaccagctggct
ctggaacgggagatgctcggactgtatgtttccgggcatccgctcgatggttacgaggaa
gcacttgatgctcagacagatacgcagctgacaacgatccttgccggtgagttgcgcaat
ggcgcagaggtacaaattggcggcattatttcgagcgtggatcgtcgttactctaagaaa
gacggctctccgtgggcgatcgtaaccattgaggaccaccatggtgctcaggtagatctg
ttggtgtttaacaagatctatgcgatagttggcccccagatcgtagaagacaacatcatt
ttggctaaggcacatgtctcgatccgagatgatcgtatgtccctcttctgcgatgacctc
aaggttcctgacttgggacccggtaacggggcaggactgcctcttcgtctgaccatgcgc
acggaacagtgcactatggcaaatattgcacggttgaaagacgtgttggctaataacaag
ggtgactctgacgtgtatctcaacatcgtgcatggcgacgaggccacagtgatgattctt
ggggaacatttacgggtgaaccgcaccgcaagcctaatgggtgatctgaaggccacgatg
gggccgggaatcctcggctag
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