Corynebacterium pseudotuberculosis 1002: CP1002_08410
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Entry
CP1002_08410 CDS
T01876
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
cpk
Corynebacterium pseudotuberculosis 1002
Pathway
cpk03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cpk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CP1002_08410 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cpk03400
]
CP1002_08410 (uvrA)
DNA repair and recombination proteins [BR:
cpk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CP1002_08410 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
CP1002_08410 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
AAA_29
AAA_21
AAA_16
RsgA_GTPase
AAA_23
APS_kinase
AAA_33
AAA_25
AAA_22
nSTAND1
nSTAND3
AAA_18
DnaJ_CXXCXGXG
Viral_helicase1
NACHT
MMR_HSR1
cobW
ScfRs
SLFN-g3_helicase
NTPase_1
Motif
Other DBs
NCBI-ProteinID:
ADL20823
LinkDB
All DBs
Position
complement(1840706..1843570)
Genome browser
AA seq
954 aa
AA seq
DB search
MADRLVVRGAREHNLKGVNIDIPRDSMVVFTGLSGSGKSSLAFDTIFAEGQRRYVESLSS
YARMFLGQMDKPDVDFIDGLSPAVSIDQKSTNRNPRSTVGTITEIYDYLRLLFARAGTAH
CPVCDAVIERQTPQQIVDQVLAMEEGLKFQVLAPVVRTRKGEFVDLFADLASQGFSRVQV
DGEVYSLTEPPKLKKQIKHDIDVVVDRLQVKPSQRQRLTDSVETALGLADGVVALDFVSL
DSSDPHRVRRFSEKMACPNGHVLSVDELEPRSFSFNSPYGACPDCDGLGTRTVVDVDLLI
PDKDAPVVRCVQPWNSSPNHKYFQKLIEGLAAALGFDPETPFSKLTKAQQNALINGSSDE
VTVRYKNRYGRVRNWTAPFEGVLGYIERKLEQTGSESQKDRLLQYTREDACKTCGGARLR
PEILAVRIRSTSHGELSIAGLSELSVNDAAEFLKSLVLGKREEIIAGAVLKEINARLKFL
LDVGLNYLTLNRSAGTLSGGEAQRIRLATQIGSGLAGVLYVLDEPSIGLHQRDNQRLIAT
LERLRDIGNTLIVVEHDEDTIRAADWLIDVGPKAGEYGGQIVYQGKPQGIIECEESITGA
YLSGRKVLGVPDERRSIDPNRKLKVVGARENNLRDIDVEIPLGVLACITGVSGSGKSTLI
NQILAKVLGNELNRSRNVPGRAKRVEGMENLDKLVQVDQSPIGRTPRSNPATYTGVFDKI
RTLFAETSEAKVRGYKAGRFSFNVKGGRCEACQGDGTLKIEMNFLPDVYVPCEVCQGARY
NRETLEVKYKGKNIAEVLDMPISEAAEFFEPITSIHRYLKTLTEVGLGYVRLGQSATTLS
GGEAQRVKLASELQKRSNGRTIYILDEPTTGLHFEDIRKLMLVIQGLVDKGNSVIVIEHN
LDVIKAADWIIDMGPEGGSGGGTVVAEGTPEAVAAVSGSYTGAFLKEVLGKQPA
NT seq
2865 nt
NT seq
+upstream
nt +downstream
nt
gtggcagatcgtcttgtagtacgtggtgcacgggaacacaacctaaaaggcgtgaatatt
gatattccgcgcgattctatggtcgtgttcacggggctatcgggatcaggaaaatcatcc
ttagcttttgacacgatttttgccgagggacaacggcgctatgttgagtctttgtcttca
tatgcccgaatgtttttagggcagatggataagccggatgtggatttcatcgatggtctt
tctcctgctgtttctattgatcagaagtccactaaccgtaatccgcgctccacggtgggc
acgattacagagatttatgattatctccgactcttgtttgctcgagctggcactgcgcat
tgtccggtctgtgatgcagtaattgagcgtcagactccacagcagatcgtcgaccaggta
ttagcaatggaagagggattaaagttccaggttctggctcctgtagtacgcactcgcaaa
ggtgaattcgttgatcttttcgcggacttagcttctcaaggtttctcacgagtgcaggtt
gatggcgaggtatattctttaacagagcctcctaagctgaagaaacaaatcaagcatgat
attgacgtggttgtggatagacttcaggtgaagccatcgcagcgacagcgtttaacagac
tctgtagagacagcattgggattagccgatggggttgttgctttggattttgtgtcctta
gattcctctgatccacatcgagttcgtcgtttctcggagaaaatggcgtgtcctaatggc
cacgtattaagtgtggatgagcttgaaccgcgttctttctcttttaattctccttatggt
gcgtgccctgattgcgatggtttaggaacccgaacggtagtagacgtcgatcttctgatt
ccagataaagacgctcccgtggtgcgctgcgttcagccttggaactcgagcccaaatcat
aaatattttcaaaaacttattgaaggacttgctgcggccctggggtttgatcccgaaact
cctttcagcaagttaaccaaagctcaacaaaatgcacttattaacggtagctctgatgag
gtgactgtacgttataaaaaccgttatggccgagtgcgaaattggacagcgccttttgaa
ggcgttttggggtatatcgagagaaagttagagcaaaccggttctgaatctcagaaggat
cggctacttcagtacacccgcgaagatgcatgtaaaacatgtggcggcgctcgcttgcgt
ccggagatcttagctgttcgtatcaggtctacctctcatggtgagctttctatcgcagga
ttgagtgagctttccgttaatgatgcggctgaattcttaaagtccttggtgctgggtaag
cgtgaagagattattgccggagctgtactgaaggaaattaatgctaggttgaaattcttg
ctagatgttgggctgaactacctcactctaaaccggagcgcaggcacattgtctggaggg
gaagcccagcgtattcgtttagctacacagattggttccgggctggctggagttctctat
gttctcgatgaaccctcgattggactgcatcaacgagataaccagcgtttgattgctacg
ctcgagcggcttcgcgatattggtaataccctcatcgttgtagagcatgatgaggacact
atccgtgcagcagattggcttatcgacgtagggccaaaggccggtgagtacggtggacaa
attgtttaccagggcaagcctcagggaatcattgagtgcgaggaatccatcactggtgcc
tatctttctggtcgaaaagtcctcggagtgccggatgaacgccgaagcattgatccaaac
cgcaagctcaaagttgtgggggcgcgagaaaacaatctgagagatattgatgttgaaata
cctttgggagtacttgcctgtattacgggagtatcgggctcgggtaaatcaacgttaatc
aatcagattcttgcaaaggtcttaggcaatgagctgaatagatcacgaaatgtcccgggg
agggcaaaacgcgttgaagggatggagaacctagataaattagtgcaggttgatcaatct
cccatcgggcgcacgcctcgttccaatcccgcaacgtatacaggggtctttgataaaatt
agaaccttgttcgcggagacctctgaagccaaagttcgaggctataaagccggccgtttc
tctttcaacgttaaaggcgggaggtgcgaagcgtgccagggcgacggaactttgaagatt
gagatgaatttcttgcctgatgtctatgttccgtgtgaggtttgtcagggcgctcgctac
aatcgtgagactttggaagttaagtacaagggaaaaaatatcgccgaagtccttgatatg
ccgataagtgaggctgctgaattctttgagccaatcacctcgattcaccgttaccttaaa
actttgacagaagtgggtttggggtacgtcagattagggcagtcagcgaccacactttct
ggaggtgaagcacaacgcgtaaaacttgcctcagagttgcagaaacgctccaacgggaga
actatttatattttggatgagccgacaacaggacttcattttgaagatattagaaagctc
atgcttgttatccagggattagtggataaaggaaattcggtcatagtaatcgagcataat
ttggatgtaataaaggctgctgactggattatcgatatgggcccagaaggagggtctggt
ggaggtactgtggttgcagaaggaacgccggaagccgttgcggccgtttcaggttcttac
actggagcttttttaaaggaagtcttaggtaaacagccggcctag
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