Corynebacterium pseudotuberculosis 1002: CP1002_08465
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Entry
CP1002_08465 CDS
T01876
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
cpk
Corynebacterium pseudotuberculosis 1002
Pathway
cpk03030
DNA replication
cpk03410
Base excision repair
cpk03420
Nucleotide excision repair
cpk03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cpk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CP1002_08465 (polA)
03410 Base excision repair
CP1002_08465 (polA)
03420 Nucleotide excision repair
CP1002_08465 (polA)
03440 Homologous recombination
CP1002_08465 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cpk03032
]
CP1002_08465 (polA)
03400 DNA repair and recombination proteins [BR:
cpk03400
]
CP1002_08465 (polA)
Enzymes [BR:
cpk01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CP1002_08465 (polA)
DNA replication proteins [BR:
cpk03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
CP1002_08465 (polA)
DNA repair and recombination proteins [BR:
cpk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
CP1002_08465 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CP1002_08465 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
DNA_pol_lambd_f
HHH_5
RecR_HhH
HHH
Motif
Other DBs
NCBI-ProteinID:
ADL20811
LinkDB
All DBs
Position
complement(1858033..1860669)
Genome browser
AA seq
878 aa
AA seq
DB search
MLIDGHSMAFRAFYALPAENFSTSGGQATNAVYGFLSMLSSLLNEEKPSHVAVAFDVGRK
TFRTDMFPDYKAQREATPPEFKGQVGLIKDVLEVLGITTLEKENYEADDVIATLATAAQP
LGFETLIVTGDRDSFQLVNATTTVLYPMRGVSVLHRFTPEAVEEKYGLTPAQYPDFAALR
GDPSDNLPNIPGVGPKTATKWIVEYGSLDELLERADEVKGKAGTSLRERLEQVRMNRTLT
EMIKDLELPYSPDQLGLKPVQVAGVAEKFDELEFGTNLRERVMSAVGADTTTALTEERAE
VTVDQASLKDWLAQHKNQGLALFVRGRGTPATGDAEALAIADKQRHVIAVDLSDIDPQDE
KALAQWLRSETPKYLHEAKATFHMLSGRGFELNGVAHDTAIAAYLLRPGQRTYDLKDVYQ
RHLQRQLSGDETQGQLSLLDAPDSEELIDSVIAILELAQELTKQLEDIDSFELYRDLELP
LVLILARMEAAGIAVDVETLEEQLKVFIERVQEHEAAARNIAGDPSLNLSSPKQLQVVLF
ETLGLPKTKKTKTGYSTAAKEIEALAVKHPDPFLDHLLAHRENQKLKTTLEGLIKAVGSD
GRIHTTFNQTVASTGRLSSTEPNLQNIPVRTQDGRRIRSAFVVGEGYETLLTADYSQIEM
RVMAHLSEDPGLIEAYRQGEDLHNYVGSRVFEVPVDQVTPELRRRVKAMSYGLVYGLSAF
GLGQQLNIPAGEAKQIMTSYFERFGGVKQYLDNVVEQARKDGFTSTLFGRRRYLPELGSD
NRVARENAERAALNAPIQGTAADIIKVAMIRVDQELKKAGVVSRVLLQVHDELVVEIAPN
ELEQVREIVEKEMDAAISLRVPLEVSAGSGPNWEVAAH
NT seq
2637 nt
NT seq
+upstream
nt +downstream
nt
atgcttatcgacggccactcgatggcgttccgtgcgttttatgcgctgccggccgaaaac
ttttccacatcgggtgggcaagcgaccaacgctgtctatggatttttatcgatgctttct
tcccttttgaatgaggagaagccgtctcacgtggcggtggcctttgacgtcggccggaag
acatttcgcacggatatgttccccgattataaggctcagcgtgaagccacacctcccgag
ttcaaaggacaagttgggctcattaaggacgtccttgaggttttgggaattactaccctg
gaaaaagagaactacgaggcagatgatgtaattgctaccctggcaactgcggcgcagcca
ctggggtttgagactctcatcgtgaccggggatcgtgactcattccaacttgtcaatgca
accacgacggttctttatcctatgcgcggggtctcggttttacatcgctttactcctgaa
gccgtggaagaaaaatatggtcttacacctgcgcaatatccggactttgcggcattgcga
ggcgacccttcagataaccttcccaacattccaggtgtggggcctaaaacggcaaccaaa
tggattgtggagtacggcagtcttgatgagctgttggagcgtgctgatgaagtcaaaggc
aaagccggcacgagtttacgcgagcgtttagaacaggttcggatgaaccgaacgctgact
gagatgatcaaagatttagagttgccgtattctccggatcagctgggacttaaacctgtt
caggtagcaggcgtggcggaaaaatttgatgagctggaatttggtaccaacctccgtgaa
cgtgtgatgagcgcagtaggagctgatacaaccacagcactcacggaagaacgtgcggaa
gtaactgtggaccaggcatctcttaaagattggttggcccaacataaaaatcaaggtctt
gcattatttgtacgtgggcgaggtaccccagcgactggagatgctgaagccttagctatc
gcagataaacaacgccatgtaattgcggttgatctttcggatattgacccgcaagatgaa
aaagctctggcgcagtggctgagaagtgagactcccaagtatttgcatgaagcaaaagca
actttccatatgctctctggccgaggatttgagcttaatggggttgcccacgatacggct
attgcggcttatctgcttaggccagggcaacgaacctatgatttgaaagacgtttatcag
cggcatcttcagcgccagctatctggagacgaaactcagggacagctttcgcttctcgac
gcccccgactctgaagagcttattgattctgtcattgcgatccttgagcttgcacaggaa
ctaaccaagcagctggaagatatcgattcttttgagctctatcgtgatcttgaattaccg
ttggtcttgattcttgcgcgtatggaagccgcaggtatcgcggttgacgtggaaacccta
gaagaacagttaaaagtttttattgagagagtccaagagcatgaagcggctgcccgaaat
attgcgggtgatccatccttaaatctttctagccctaaacaactccaagttgttcttttt
gaaaccctggggttgcctaaaaccaagaagacaaaaacggggtattccacagcagctaaa
gagattgaagcattggctgtgaaacacccagatcctttcctcgaccatctgctcgcgcac
cgcgagaatcagaaactgaaaacaactcttgaaggtttgattaaggcagtcgggtcggat
ggccgtatccataccacttttaatcagactgttgcgtctactgggcgtctaagttcaaca
gaacctaatctccaaaacattccagttcgcacacaagacggcagaagaattagatcggca
ttcgttgtaggcgaaggctatgaaacgctgctcaccgcagattactctcagattgagatg
cgcgtcatggcgcatctttcggaggacccgggtcttatcgaggcttaccgtcagggggaa
gatctccataactacgttggatccagagtctttgaggttccggtggatcaggtaacacca
gagctacgtcgacgagtaaaagcgatgagttatggcctggtctatggcctctcagccttt
ggcctggggcaacagttgaatattcctgccggtgaggctaaacagattatgacgagctac
ttcgagcgttttggtggggtgaaacagtatctggataatgtggtggaacaagcacggaaa
gatggttttacctctacattatttggcagacgccgataccttccagagctcggctcagat
aatcgtgtggctcgtgaaaatgcagaacgtgctgcgcttaatgcccctatccagggaacg
gcggcggatattattaaggtcgcaatgattcgtgttgaccaagagttgaaaaaagctggg
gttgtctctcgtgtgttgctgcaagttcacgatgaactggtggtggaaatcgcaccaaac
gagcttgagcaagtgcgtgagatagtagaaaaggaaatggatgcagccatttccttacgc
gtaccacttgaagtctcagcaggtagtggtcccaactgggaagtcgccgcgcactag
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