Corynebacterium pseudotuberculosis 1002: CP1002_09940 Help Entry CP1002_09940      CDS       T01876                                  Name (GenBank) ATP-dependent helicase   KO K03724   ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4] Organism cpk  Corynebacterium pseudotuberculosis 1002 Brite KEGG Orthology (KO) [BR:cpk00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:cpk03400]     CP1002_09940 Enzymes [BR:cpk01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.4  DNA 3'-5' helicase      CP1002_09940     5.6.2.6  RNA 3'-5' helicase      CP1002_09940 DNA repair and recombination proteins [BR:cpk03400]  Prokaryotic type   Other factors with a suspected DNA repair function    DNA helicases     CP1002_09940 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DEAD_assoc WHD_Lhr WHD_3rd_Lhr WHD_2nd_Lhr DEAD WHD_4th_Lhr Helicase_C AlkZ-like ResIII AAA_25 DUF6406 Motif Other DBs NCBI-ProteinID:  ADL20528 LinkDB All DBs Position complement(2174301..2179172) Genome browser AA seq 1623 aa AA seqDB search MLSRFNPQIATWFAEVFAEPTPVQKAAWEKISLGGNTLIVAPTGSGKTLAAFLWAINGLS VASGQTVAFPAPKNKPLAGKETNQGVKVLYISPLKALGVDVENNLRAPLTGINHVAARLG LEYSDISVAVRSGDTPAAERARQVRKPPDILITTPESAYLMLTSKAGAILKNVETVIVDE IHAVAGTKRGAHLSLTLERLERLAGRTIQRVGLSATARPIDAVAHFLAGDRPVDIVNPRI DKQWELSVRVPVADMSDGTTTRSDSTAGEATYNGAHNLGSVLSDLPDTELLSESALPTQG SIWPFIEERVYHDVMTHRSTLIFVNSRRTAERLTSRLNEIYAEEHDPESLSPQLRRTPAQ LMKASDVAGLAPTVIARAHHGSVSKDERAETERMLKEGSLRAVVATSSLELGIDMGAVEL VVQVESPPSVASGLQRVGRAGHMVGALSKGVFYPKHRADLIQTAVVVGRMDEGAIEELKV PRNALDVLLQQTVAAVSVEDLDVEEWYATVVRAYPYRDLSRSVFDAVIDLASGVYPSTDF AELRPRVVFDRITGRLTARPGAQRVAVTSGGTIPDRGMFGVFLAVQTGTGSVPRRVGELD EEMVYESRVGDVFTLGASSWRIEEITRDQVLVIPAPGHTGRLPFWTGDQVGRLAELGKAL GEFRRRTLARCQSLEDNAKENHGGDLLELEELGLDAFARQNLVQFLHDQQEATGIVPDEK TLVLERFHDELGDWRIVLHTPYGRGVNAAWALAVGARISERTGIDAQAVASDDGIVLRLP ESDEEPGADLFMIDPDDIEALVAEQVGNSALFASRFRECAARALLLPRRDPGKRAPLWQQ RQRAAQLLDVARKYPSFPIILETVRECLQDVYDLPALVELLQEIKQRRIRIAEVVTSQPS PFAASILFSYTGAFMYEGDSPLAEKRAAALSLDPALLASLLGTVELRDLLDPEIIAEVHD TMQRKAPHRRAKTTEELVDALRVLGPVPLSDLPAITEPPMNREQVMAQLRGRVMEVRIAG VSHLAQTLDAPLLRDALGIPIPPGVAAQVETITDALEQLVSRWVRVRGPFTLMDVQHSFG LAAGIAHGVVEKLCAQSKLVAGRFRQDSDVQEYVATEVLKIIRARSLAAVREQTQPVSHA AFGRFLPEWQHVASVGETPELAGPDGVFNVVEQLAGVRLPASAWETLVLPQRVRNYSPLD LDELTNNGEVIVVGAGRAGAHDPWVMLLPTDYAAELIPHVDIETLSETQQKIMAVLSRGG GFLFSDIYRETVSEHETSPEQSFVPELGSALWDLFEAGLVSPDGFAPIRARLAAHSGTKT AHRTSRRPNRSRIRMGRTSFAHSHRLAQPPDVIGRWATTAAAEDNATARSVAHGEAWLDR YGVVTRGAVVSEDVVGGFALAYKVLSGFEESGKALRGYLIEGLGAAQFSTSAVIDRLRGL ADTPDIAGWPSGASSPRVYVLAAADPANPYGAALPWPEPGPTRAAGAVVVLIDGLLAAHL TRGGRNLTLFSPPTGVEQQEFLGIVLGALAESVLTGKIQPLIVEKINGVAVLRSPELEML RILGVGITPRGARISGDLSNQGQARRGRSLSSALDSLSSLESEPGSGQHKKSPHRGFRSG GYR NT seq 4872 nt NT seq  +upstreamnt  +downstreamnt gtgctgtcgcgttttaaccctcagatagcaacatggtttgcggaggtttttgcagaacct acacctgtgcaaaaggctgcgtgggaaaagatttcattgggcggaaacaccctcatcgtt gccccgactggatctggtaaaacactcgccgctttcttgtgggcaatcaatggtttgagc gtagcaagtggtcaaaccgtggcttttccagctcctaaaaacaagcctttagctggtaaa gagacaaaccaaggcgtcaaggtgctgtatatatcaccactgaaggcgctgggtgtggac gtagaaaacaatcttcgtgcaccattgacgggcatcaaccacgtagctgctcgtttagga ctggaatattccgacatcagtgtggcagtccgttccggggataccccggcggcagaacgg gctagacaggtgagaaaacctccagacattttgatcaccacccccgagtccgcgtatctc atgctgacgtctaaagcgggagcgattcttaaaaatgttgagaccgtcatcgtggatgag attcatgcggtggctggaacaaaacggggagcccatctttccctaacattagaacgactg gaacggctggcaggtcgtactattcaacgggtggggttatcggcaacagcgcgcccgatc gacgccgtagcgcactttttagcgggggaccgccccgtagacattgtaaatccacgcata gacaagcagtgggagcttagcgttagggtgcctgttgcagacatgagcgatgggaccacc acgcggtctgattccaccgccggggaagctacgtacaacggcgcacacaacctcggatca gtgctatctgatctacctgatacggagcttttatcagaatctgcccttcctacgcagggg tcgatatggccgtttattgaggaacgcgtttatcacgacgtgatgacgcatcgctctacg ttaatctttgtgaattctaggaggactgcggaacggctcactagccgtctcaatgagatt tacgcagaagaacacgacccagaatcgctctccccgcagctacgcagaacacccgcgcag ctgatgaaggctagtgacgtggcaggattagctcccacggttattgcgagagcacaccac ggttccgtctctaaagatgagcgagcagagacagaaaggatgctcaaagaggggagtctc cgggccgtagtagccaccagttcccttgaacttggtatcgatatgggtgccgtagaactc gttgttcaggtggagtccccgccttcagttgcctcagggctacagcgggtggggcgtgcc ggccacatggtgggtgcgctttctaaaggcgtcttttatccgaagcatcgtgctgactta atccaaactgccgtggttgtggggcgcatggatgaaggcgcgatcgaggaattgaaggta cccaggaacgcactcgatgtgttattgcagcaaaccgtagcagcggtatccgtggaagac cttgacgtagaagagtggtatgccactgttgtgcgcgcgtatccctatcgggatttatca cgatcggtatttgatgcagtcattgatttagcaagtggggtgtatccctcgacagatttt gctgagctgaggccacgcgtggtgtttgaccggatcaccggcaggctgactgctcgacct ggagcccagcgggtagcagtaacaagcggcggaactattcccgatcgcggcatgtttggt gtctttttagcagttcagacgggtacaggctcggtccccaggcgagtgggggaactcgac gaggagatggtatatgagtcacgcgtaggcgacgtgtttacgcttggtgcctctagctgg aggatcgaagagattactcgagaccaggtgctggtgattcccgcgccggggcacacggga aggcttcctttttggacgggtgatcaggtcgggcgcctcgcagaattaggtaaagctcta ggagagttccgccgtaggactttggcgcgttgtcaatctttagaagacaacgcgaaggag aatcatggtggtgatctcttagaactggaagaactcggtctcgatgcattcgctcgccag aatctcgtgcagtttttacacgaccaacaggaagctacggggatagtccccgatgaaaaa acattggttttagagcggtttcatgatgagctcggcgattggagaatagtcttgcacact ccttatggcaggggagttaacgctgcatgggcacttgcagtgggagcaagaatatctgaa cgcacgggcatagacgctcaggcggtggcctccgatgacggtatcgtattgcgtcttcca gaatccgacgaggagccgggagctgatctgtttatgatcgacccggatgatattgaggca ctagtggccgaacaagtgggaaactccgcgctgtttgcttccaggttccgtgaatgcgct gctcgcgctttgttactgccgcgacgtgaccccggcaagcgcgcccctttatggcaacaa cgccagcgcgctgcgcagcttctcgacgtcgcccgtaaatacccatccttccccataatt ttggagaccgtccgagaatgcctccaggacgtgtatgacctgccagctttggtcgagctc ttgcaagaaatcaagcaacggcggatacgaatcgcggaggttgttacatctcaacccagc ccattcgctgcctccatactttttagctacacgggtgcctttatgtatgagggagacagt cctctcgcagaaaagcgtgctgctgctttatccctagaccccgcgctgctcgcaagtctt ctagggaccgtggaattacgtgatcttttagatccagaaatcatcgcggaagtacatgac accatgcaacgcaaagcccctcaccgcagggcgaagaccacagaagaactcgttgacgct cttcgcgttttaggccctgtgccgttgagcgatctcccggcgattacggaacctccgatg aatcgggagcaggttatggctcagctgcgcgggcgagtgatggaagtgcggatagcggga gtctcgcatctcgcgcaaacgttggatgcgccactactgagagacgcgttaggcataccc attcctccgggagttgctgctcaggtggagacgatcactgatgccctggagcaactcgtc tcacggtgggtgcgggtgcgaggtccttttaccctcatggatgtgcagcattcctttgga ttggctgcggggatcgcccatggggtcgtcgagaagctatgcgcacaatccaagctcgta gcggggcgttttagacaagatagcgacgtacaagaatatgtggctactgaggtcttaaaa atcataagggcccgatccctggctgcggtgagagagcaaactcagccggtgagtcatgcc gcattcgggcgcttcctgcctgaatggcagcacgttgcgtcagtaggagagacgcccgag ctcgccggtcctgatggagtatttaacgttgtagagcaactagcaggcgtgcgtttgccg gcttctgcgtgggaaacattggtgttgcctcaacgggtccggaattattcgccgctagac cttgacgagctcacaaataatggcgaggtgattgttgtcggggcaggacgcgccggcgcg catgacccgtgggtgatgcttctcccgaccgattacgcggcagagttgattcctcacgtg gatatagagacattatccgaaacccagcaaaaaattatggctgtgctttctcgcggtggc ggctttctttttagcgatatttaccgagaaactgtgtcagaacatgaaacttccccggaa caatcgtttgtgccagagcttggttctgcgttgtgggatctttttgaggcagggctagtc agcccggatgggttcgcgccgattcgtgcgcggctcgcggcgcattcggggaccaagacc gcacatagaacctcacggcgtcccaaccgcagcagaatacggatgggacgcacgagtttt gcgcatagtcacagattagcacaaccaccggacgtaataggacgctgggcaacaacagcg gcagcagaggacaacgctaccgctaggtcagtcgcgcatggggaggcgtggttagacaga tatggtgtggttacccgaggcgccgttgtatcagaggacgttgttggcggttttgccctc gcctacaaggtgctttctggttttgaggaatccggtaaagccctacgcggctaccttatt gaggggttgggggccgctcagttttccacatcagcggtaatcgacagacttcgggggcta gcagatactcccgatattgctggttggccttctggggcgagttcaccacgcgtatacgtg ctggctgctgcggatcccgctaacccctatggggcggcgctaccgtggccggaaccaggg ccaacgcgggcagctggtgctgttgttgtgcttatcgacggcctcctcgccgcgcacctt acacgaggcggaagaaacctcacgttgttttcaccgcctacgggagttgaacaacaagaa ttcttaggtatcgttcttggcgcgcttgcagaatccgtgctaacaggaaagattcagccg ttgattgtagaaaaaataaacggagtggcggtattgcgttcgcccgaattagagatgtta agaatcttaggcgttgggataacaccccgtggggcacggatatcaggagacttgagtaac caaggccaagcacgtaggggacgcagcctttcatccgcattggactcgttgtcttcctta gaatcagagcctgggagtggacagcacaaaaagtctccgcatcgtggttttaggtctggt ggataccgctaa

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