Corynebacterium pseudotuberculosis 1002: CP1002_10150
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Entry
CP1002_10150 CDS
T01876
Name
(GenBank) DEAD/DEAH box helicase
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
cpk
Corynebacterium pseudotuberculosis 1002
Pathway
cpk03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cpk00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
CP1002_10150
09124 Replication and repair
03420 Nucleotide excision repair
CP1002_10150
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cpk03021
]
CP1002_10150
03400 DNA repair and recombination proteins [BR:
cpk03400
]
CP1002_10150
Enzymes [BR:
cpk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CP1002_10150
Transcription machinery [BR:
cpk03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
CP1002_10150
DNA repair and recombination proteins [BR:
cpk03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
CP1002_10150
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
DEAD
SNF2-rel_dom
AAA_22
Motif
Other DBs
NCBI-ProteinID:
ADL20485
LinkDB
All DBs
Position
2221731..2223380
Genome browser
AA seq
549 aa
AA seq
DB search
MAFGDGPLIVQSDKTVLLEIDHPQADPARAALAPFAELERAPEHIHTYRITPLALWNARA
AGHDAEGIVDVLETFSRFPVPQALLIDVAETMSRYGRVRLHKHPAHGLILESTEPAILAE
LIRHKKIRPMLGAQIDEETIVVHPSERGRLKQELLKVGWPAEDLAGYVDGEAHPIALSQE
HEHWELRDYQRMAADSFWEGGSGVVVLPCGAGKTMVGAASMARAQATTLILVTNTVAGRQ
WRDELLRRTTLTPEEIGEYSGEKKEIRPVTIATYQVVTRKTKGEYRALELFDSRDWGLII
YDEVHLLPAPVFRMTSDLQSRRRLGLTATLVREDGREGDVFSLIGPKRYDAPWKDLEQRG
FIATAECTEVRTTMTHEERMLYATAENQDRYRIAACAESKLRAVDTLLHRHQGLPTLIIG
AYIDQLEELGARFDAPVIEGKTSNKKREELFNKFRAGHITTLVVSKVANFSIDLPEAAVA
IQVSGTFGSRQEEAQRLGRLLRPKADGSEAHFYSVVSRDSLDSEYAAHRQRFLAEQGYAY
RIVDAADLG
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
gtggcatttggtgacggaccgctgatcgttcagtcggataaaaccgttttgttagaaatc
gatcacccccaagcagacccagcacgagcggcgctagcgccctttgcggagcttgaacgt
gcaccagagcacattcatacgtatcggatcactcctttagctttatggaatgcacgcgct
gcaggccacgatgcagaaggcattgttgatgtattagagactttctcgcgttttcccgtt
ccccaggctttgcttatcgacgtcgcagagaccatgtctaggtacggtcgagtgcgcctg
cacaagcatcctgcacatggtctcattcttgagtccacagaaccggcaattctcgccgag
ctgatacgccataagaaaattcgtcccatgctaggcgcacaaatcgacgaggaaacaatc
gttgtgcacccttcagaaagagggcgtctcaagcaagagcttctcaaggttggctggccg
gccgaagaccttgcgggctatgtggatggcgaggctcaccctattgcgttgtctcaagaa
catgagcattgggagctccgcgactatcaaaggatggcggcggattctttttgggaggga
ggaagcggcgtggttgttctcccctgcggagctggaaaaaccatggtgggagccgcttct
atggcccgggcgcaagctaccacccttattttggttactaacacagtagccggacgacaa
tggcgcgatgagctactgcgacgcacaacgctaacgccagaagagatcggcgagtattcc
ggggagaaaaaggagattcgaccagttactatcgcaacgtatcaagtggtcacacgcaaa
accaaaggagaatatcgagctcttgagctctttgattctcgcgactggggactcattatt
tatgatgaagtccacctgcttccggcaccggtcttccggatgacctcagatctccagtct
cgcagacgcctagggcttaccgcgacgctcgttagagaagacggtcgggaaggcgatgta
tttagcctgattggccccaaacgctatgacgccccgtggaaggacctagagcaacgcgga
tttatcgctaccgcggaatgcactgaagtccgcaccaccatgacgcacgaagagcgcatg
ctctatgccacggcagagaaccaagatcggtaccgcattgccgcctgcgcggagtccaag
cttcgtgccgtcgatacgctattacaccgacatcaaggcttacccacgctcatcattggt
gcatacattgaccaattagaagaactcggcgcgcgctttgatgcccctgtgatcgaagga
aaaacaagtaataaaaagcgtgaggagctatttaacaaattccgcgctggccacatcacc
acgttagttgtaagcaaagtggctaacttctctatcgatttgccagaagccgccgtagct
atccaggtctcgggcacctttgggtcacggcaggaggaggcgcaaaggctaggcagacta
ttacgtccaaaggctgacggctcagaggcgcacttctatagcgttgtaagccgcgacagt
ctcgatagcgagtatgcggcacacaggcaacgattcctggccgaacagggctatgcatac
cggattgttgacgcagccgacctaggctag
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