Corynebacterium pseudotuberculosis 1002: CP1002_10320
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Entry
CP1002_10320 CDS
T01876
Name
(GenBank) Fpg/Nei family DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
cpk
Corynebacterium pseudotuberculosis 1002
Pathway
cpk03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cpk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CP1002_10320
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cpk03400
]
CP1002_10320
Enzymes [BR:
cpk01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
CP1002_10320
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
CP1002_10320
DNA repair and recombination proteins [BR:
cpk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
CP1002_10320
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
H2TH
Fapy_DNA_glyco
zf-FPG_IleRS
Motif
Other DBs
NCBI-ProteinID:
ADL21900
LinkDB
All DBs
Position
2257966..2258787
Genome browser
AA seq
273 aa
AA seq
DB search
MMDSMPEGHVIHRLARELNKHFQGKAPRVTSPQGRFAAEAALIHAAPFYQAHAWGKHLFI
EFDAPTPERIVHIHLGLIGSLHFDPIEEAKGQIRLRIEGDKVAANLRGPQWCRLITTEEM
EVAVGKLGADPLRPDSDLSLVCQRVARSQRSIGSLLMDQRLFAGVGNIYRAESLFRLGIS
PFTPGREVENLGQIWEDLVYLMQEGVRVGRIDTVRPEHTPQAMGRAPRKDDHGGEVYVYR
RLGQPCYVCGTPISGQVMEGRNLFWCPTCQPRP
NT seq
822 nt
NT seq
+upstream
nt +downstream
nt
atgatggacagcatgccagaaggccatgtcatccaccggctcgcccgcgagctcaacaag
cattttcaaggaaaagcgccacgcgtcacatcccctcagggaagattcgccgcagaagca
gcacttatccacgccgctccgttttatcaggcccacgcatggggcaagcatcttttcatt
gaattcgatgcccccacgccagaacgcattgtgcatatccacttaggcctgatcggaagc
ctgcattttgacccgattgaagaggccaaggggcagatccgactacggatagagggtgac
aaagtagcagcaaatctacgaggaccacagtggtgtcgccttattacgacggaagagatg
gaggtagccgtcggcaagcttggtgcagacccgctgcgcccagactcagacctaagcctc
gtttgccagcgtgtcgcgcgttcacagagatcgatcggatcgttactcatggaccagcgg
ctttttgccggcgtggggaatatctaccgtgcggaatcgctctttcgcctggggataagc
ccctttacgcccggccgcgaagtggaaaatcttggccaaatatgggaagacttggtttat
ctcatgcaggagggggtgcgggtaggacgcatcgataccgtccgtcctgaacacactcct
caagccatgggccgagcaccccgtaaagacgaccatggcggagaggtctatgtgtatcgt
cgattgggccagccctgttatgtgtgcggcacacctatcagcgggcaagtaatggagggt
cgaaacctcttctggtgtcccacctgccagcctcgaccatag
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